1gq2: Difference between revisions

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OCA

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-==MALIC ENZYME FROM PIGEON LIVER==
-<StructureSection load='1gq2' size='340' side='right' caption='[[1gq2]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
+==Malic Enzyme from Pigeon Liver==
+<StructureSection load='1gq2' size='340' side='right'caption='[[1gq2]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1gq2]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Colli Colli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GQ2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GQ2 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1gq2]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Columba_livia Columba livia]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GQ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GQ2 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=OXL:OXALATE+ION'>OXL</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=OXL:OXALATE+ION'>OXL</scene></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Malate_dehydrogenase_(oxaloacetate-decarboxylating)_(NADP(+)) Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.40 1.1.1.40] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gq2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gq2 OCA], [https://pdbe.org/1gq2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gq2 RCSB], [https://www.ebi.ac.uk/pdbsum/1gq2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gq2 ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gq2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gq2 OCA], [http://pdbe.org/1gq2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1gq2 RCSB], [http://www.ebi.ac.uk/pdbsum/1gq2 PDBsum]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/MAOX_COLLI MAOX_COLLI]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/1gq2_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/1gq2_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
@@ Line 34: / Line 36: @@
 __TOC__
 </StructureSection>
-[[Category: Colli]]
+[[Category: Columba livia]]
-[[Category: Liang, T]]
+[[Category: Large Structures]]
-[[Category: Yang, Z]]
+[[Category: Liang T]]
-[[Category: Zhang, H]]
+[[Category: Yang Z]]
-[[Category: Decarboxylase]]
+[[Category: Zhang H]]
-[[Category: Malate]]
-[[Category: Malic enzyme]]
-[[Category: Mn2+]]
-[[Category: Nad-nadp selectivity]]
-[[Category: Nadp-dependent]]
-[[Category: Oxidoreductase]]
-[[Category: Pigeon liver]]