1btu: Difference between revisions

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[[Image:1btu.gif|left|200px]]<br />
<applet load="1btu" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1btu, resolution 1.6&Aring;" />
'''PORCINE PANCREATIC ELASTASE COMPLEXED WITH (3S, 4R)-1-TOLUENESULPHONYL-3-ETHYL-AZETIDIN-2-ONE-4-CARBOXYLIC ACID'''<br />


==Overview==
==PORCINE PANCREATIC ELASTASE COMPLEXED WITH (3S, 4R)-1-TOLUENESULPHONYL-3-ETHYL-AZETIDIN-2-ONE-4-CARBOXYLIC ACID==
beta-Lactam inhibitors of transpeptidase enzymes involved in cell wall, biosynthesis remain among the most important therapeutic agents in, clinical use. beta-Lactams have more recently been developed as inhibitors, of serine proteases including elastase. All therapeutically useful, beta-lactam inhibitors operate via mechanisms resulting in the formation, of hydrolytically stable acyl-enzyme complexes. Presently, it is difficult, to predict which beta-lactams will form stable acyl-enzyme complexes with, serine enzymes. Further, the factors that result in the seemingly special, nature of beta-lactams versus other acylating agents are unclear-if indeed, they exist. Here we present the 1.6 A resolution crystal structure of a, stable acyl-enzyme complex formed between porcine pancreatic elastase and, a representative monocyclic beta-lactam, which forms a simple acyl-enzyme., The structure shows that the ester carbonyl is not located within the, oxyanion hole and the "hydrolytic" water is displaced. Combined with, additional kinetic and mass spectrometric data, the structure allows the, rationalization of the low degree of hydrolytic lability observed for the, beta-lactam-derived acyl-enzyme complex.
<StructureSection load='1btu' size='340' side='right'caption='[[1btu]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1btu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BTU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BTU FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2BL:(3R)-3-ETHYL-N-[(4-METHYLPHENYL)SULFONYL]-L-ASPARTIC+ACID'>2BL</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1btu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1btu OCA], [https://pdbe.org/1btu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1btu RCSB], [https://www.ebi.ac.uk/pdbsum/1btu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1btu ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CELA1_PIG CELA1_PIG] Acts upon elastin.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bt/1btu_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1btu ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
beta-Lactam inhibitors of transpeptidase enzymes involved in cell wall biosynthesis remain among the most important therapeutic agents in clinical use. beta-Lactams have more recently been developed as inhibitors of serine proteases including elastase. All therapeutically useful beta-lactam inhibitors operate via mechanisms resulting in the formation of hydrolytically stable acyl-enzyme complexes. Presently, it is difficult to predict which beta-lactams will form stable acyl-enzyme complexes with serine enzymes. Further, the factors that result in the seemingly special nature of beta-lactams versus other acylating agents are unclear-if indeed they exist. Here we present the 1.6 A resolution crystal structure of a stable acyl-enzyme complex formed between porcine pancreatic elastase and a representative monocyclic beta-lactam, which forms a simple acyl-enzyme. The structure shows that the ester carbonyl is not located within the oxyanion hole and the "hydrolytic" water is displaced. Combined with additional kinetic and mass spectrometric data, the structure allows the rationalization of the low degree of hydrolytic lability observed for the beta-lactam-derived acyl-enzyme complex.


==About this Structure==
Inhibition of elastase by N-sulfonylaryl beta-lactams: anatomy of a stable acyl-enzyme complex.,Wilmouth RC, Westwood NJ, Anderson K, Brownlee W, Claridge TD, Clifton IJ, Pritchard GJ, Aplin RT, Schofield CJ Biochemistry. 1998 Dec 15;37(50):17506-13. PMID:9860865<ref>PMID:9860865</ref>
1BTU is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa] with CA, SO4 and 2BL as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Pancreatic_elastase Pancreatic elastase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.36 3.4.21.36] Structure known Active Site: CAT. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1BTU OCA].


==Reference==
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
Inhibition of elastase by N-sulfonylaryl beta-lactams: anatomy of a stable acyl-enzyme complex., Wilmouth RC, Westwood NJ, Anderson K, Brownlee W, Claridge TD, Clifton IJ, Pritchard GJ, Aplin RT, Schofield CJ, Biochemistry. 1998 Dec 15;37(50):17506-13. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=9860865 9860865]
</div>
[[Category: Pancreatic elastase]]
<div class="pdbe-citations 1btu" style="background-color:#fffaf0;"></div>
[[Category: Single protein]]
 
==See Also==
*[[Elastase 3D structures|Elastase 3D structures]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
[[Category: Clifton, I.J.]]
[[Category: Clifton IJ]]
[[Category: Schofield, C.J.]]
[[Category: Schofield CJ]]
[[Category: Wilmouth, R.C.]]
[[Category: Wilmouth RC]]
[[Category: 2BL]]
[[Category: CA]]
[[Category: SO4]]
[[Category: hydrolase]]
[[Category: serine proteinase]]
 
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