Proteopedia:I3DC: Difference between revisions

=== Acta Cryst D ''Acta Crystallographica Section D: Biological Crystallography'' ===

# [[Journal:Acta Cryst D:S2059798318000050|A DNA structural alphabet provides new insight into DNA flexibility]], Bohdan Schneider, Paulina Bozikova, Iva Necasova, Petr Cech, Daniel Svozil and Jiri Cerny [https://dx.doi.org/10.1107/S2059798318000050 https://dx.doi.org/10.1107/S2059798318000050]

# [[Journal:Acta Cryst D:S2059798318014900|Structure of the AmyC GH13 alpha-amylase from ''Alicyclobacillus sp'', reveals accommodation of starch branching points in the alpha-amylase family]], Jon Agirre, Olga Moroz, Sebastian Meier, Jesper Brask, Astrid Munch, Tine Hoff, Carsten Andersen, Keith S. Wilsona and Gideon J. Davies [https://dx.doi.org/10.1107/S2059798318014900 https://dx.doi.org/10.1107/S2059798318014900]

# [[Journal:Acta Cryst D:S2059798318015322|Structure of ISG15 from the bat species ''Myotis davidii'' and the impact of interdomain ISG15 interactions on viral protein engagement]], Caroline Langley, Octavia Goodwin, John V. Dzimianski, Courtney M. Daczkowski and Scott D. Pegan [https://dx.doi.org/10.1107/S2059798318015322 https://dx.doi.org/10.1107/S2059798318015322]

# [[Journal:Acta Cryst D:S2059798318017047|The crystal structure of the N-acetylglucosamine 2-epimerase from ''Nostoc sp.'' KVJ10 reveals the true dimer]], Marie-Josee Haglund Halsør, Ulli Rothweiler, Bjørn Altermark and Inger Lin Uttakleiv Ræder [https://dx.doi.org/10.1107/S2059798318017047 https://dx.doi.org/10.1107/S2059798318017047]

# [[Journal:Acta Cryst D:S2059798319000214|In-house high energy remote SAD-phasing using the magic triangle: how to tackle the P1 low symmetry using multiple orientations on the same human IBA57 crystal to increase multiplicity]], Spyridon Gourdoupis, Veronica Nasta, Simone Ciofi-Baffoni, Lucia Banci and Vito Calderone [https://dx.doi.org/10.1107/S2059798319000214 https://dx.doi.org/10.1107/S2059798319000214]

# [[Journal:Acta Cryst D:S2059798319000676|Crystal structures of pyrrolidone-carboxylate peptidase I from ''Deinococcus radiodurans'' reveal the mechanism of L-pyroglutamate recognition]], Ravindra Makde [https://dx.doi.org/10.1107/S2059798319000676 https://dx.doi.org/10.1107/S2059798319000676]

# [[Journal:Acta Cryst D:S2059798319002304|The third structural switch in the molecule of archaeal translation initiation factor 2 and its possible role in initiation of GTP hydrolysis and removal of aIF2 from the ribosome]], Oleg Nikonov, Olesya Kravchenko, Natalia Nevskaya, Elena Stolboushkina, Maria Garber and Stanislav Nikonov [https://dx.doi.org/10.1107/S2059798319002304 https://dx.doi.org/10.1107/S2059798319002304]

# [[Journal:Acta Cryst D:S2059798319002912|Crystal structure of the pseudoenzyme PDX1.2 in complex with its cognate enzyme PDX1.3]], Graham C. Robinson, Markus Kaufmann, Céline Roux, Jacobo Martinez-Font, Michael Hothorn, Stéphane Thore, and Teresa B. Fitzpatrick [https://dx.doi.org/10.1107/S2059798319002912 https://dx.doi.org/10.1107/S2059798319002912]

# [[Journal:Acta Cryst D:S2059798319004169|Structural and functional insights into phosphomannose isomerase]], Mamata Bangera, Giri Gowda K., S.R. Sagurthi and M.R.N. Murthy [https://dx.doi.org/10.1107/S2059798319004169 https://dx.doi.org/10.1107/S2059798319004169]

# [[Journal:Acta Cryst D:S2059798319006995|Structural insight into a matured humanized monoclonal antibody HuA21 against HER2-overexpressing cancer cells]], Zhenyi Wang, Liansheng Cheng, Gongrui Guo, Baoyun Cheng, Siyi Hu, Hongmin Zhang, Zhongliang Zhu and Liwen Niu [https://dx.doi.org/10.1107/S2059798319006995 https://dx.doi.org/10.1107/S2059798319006995]

# [[Journal:Acta Cryst D:S2059798319007113|Crystal Structure Determination of ''Pseudomonas stutzeri'' A1501 endoglucanase Cel5A]], Raphael Dutoit, Maud Delsaute, Laetitia Collet, Corinne Vander Wauven, Dany Van Elder, Renaud Berlemont, Aurore Richel, Moreno Galleni and Cedric Bauvois [https://www.ncbi.nlm.nih.gov/pubmed/31205022 https://www.ncbi.nlm.nih.gov/pubmed/31205022]

# [[Journal:Acta Cryst D:S2059798319009008|Combining rMMS and the Magic Triangle for the efficient structure solution of a bacteriophage P68 lysin]], Jia Quyen Truong, Santosh Panjikar, Linda Shearwin, John Bruning and Keith Shearwin [https://dx.doi.org/10.1107/S2059798319009008 https://dx.doi.org/10.1107/S2059798319009008]

# [[Journal:Acta Cryst D:S2059798319009574|Biochemical and structural explorations for α-hydroxyacid oxidases reveal a 4-electron oxidative decarboxylation reaction]], Yeh HW, Lin KH, Lyu SY, Li YS, Huang CM, Wang YL, Shih HW, Hsu NS, Wu CJ, Li TL [https://dx.doi.org/10.1107/S2059798319009574 https://dx.doi.org/10.1107/S2059798319009574]

# [[Journal:Acta Cryst D:S2059798319011355|Comparison of a retroviral protease crystallized as a monomer and a dimer]], Stanislaw Wosicki, Miroslaw Gilski, Helena Zabranska, Iva Pichova, Mariusz Jaskolski [https://dx.doi.org/10.1107/S2059798319011355 https://dx.doi.org/10.1107/S2059798319011355]

# [[Journal:Acta Cryst D:S2059798320003101|The crystal structure of heme ''d₁'' biosynthesis-associated small c-type cytochrome NirC reveals mixed oligomeric states ''in crystallo'']], Thomas Klünemann, Steffi Henke and Wulf Blankenfeldt [https://dx.doi.org/10.1107/S2059798320003101 https://dx.doi.org/10.1107/S2059798320003101]

# [[Journal:Acta Cryst D:S205979832000501X|A Baculoviral System for the Production of Human β-Glucocerebrosidase Enables Atomic Resolution Analysis]], Rhianna J. Rowland, Liang Wu, Feng Liu and Gideon J. Davies [https://dx.doi.org/10.1107/S205979832000501X https://dx.doi.org/10.1107/S205979832000501X]

# [[Journal:Acta Cryst D:S2059798320006841|A new modulated crystal structure of ANS complex of St John's wort Hyp-1 protein with 36 protein molecules in the asymmetric unit of the supercell]], Joanna Smietanska, Joanna Sliwiak, Miroslaw Gilski, Zbigniew Dauter, Radoslaw Strzalka, Janusz Wolny, Mariusz Jaskolski [https://dx.doi.org/10.1107/S2059798320006841 https://dx.doi.org/10.1107/S2059798320006841]

# [[Journal:Acta Cryst D:S205979832000772X|Structural evidence for mono- and di-carboxylates binding at pharmacologically relevant extracellular sites of a pentameric ligand gated ion channel]], Zaineb Fourati, Ludovic Saugueta, and Marc Delarue [https://dx.doi.org/10.1107/S205979832000772X https://dx.doi.org/10.1107/S205979832000772X]

# [[Journal:Acta Cryst D:S2059798320008116|Novel structure of the N-terminal helical domain of BibA, a Group B Streptococcus immunogenic bacterial adhesin]], Kartik Manne, Debasish Chattopadhyay, Vaibhav Agarwal, Anna M. Blom, Baldeep Khare, Srinivas Chakravarthy, Chungyu Chang, Hung Ton-That and Sthanam V. L. Narayana [https://dx.doi.org/10.1107/S2059798320008116 https://dx.doi.org/10.1107/S2059798320008116]

# [[Journal:Acta Cryst D:S2059798320008475|Getting the best of ID30B for RT data collection in microchips]], Jose A. Gavira, Isaac Rodriguez-Ruiz, Sergio Martinez-Rodriguez, Shibom Basu, Sébastien Teychené, Andrew A. McCarthy and Christoph Mueller-Dieckmann [https://dx.doi.org/10.1107/S2059798320008475 https://dx.doi.org/10.1107/S2059798320008475]

# [[Journal:Acta Cryst D:S2059798320010906|Structure of CYRI-B / FAM49B, a key regulator of cellular actin assembly]], Elise Kaplan, Rachael Stone, Peter J. Hume, Nicholas P. Greene and Vassilis Koronakis [https://dx.doi.org/10.1107/S2059798320010906 https://dx.doi.org/10.1107/S2059798320010906]

# [[Journal:Acta Cryst D:S2059798320011869|Lattice-translocation defects in some specific crystals of the catalytic head domain of influenza neuraminidase]], Linghui Li, Shuliu Dai, George F. Gao and Jiawei Wang [https://dx.doi.org/10.1107/S2059798320011869 https://dx.doi.org/10.1107/S2059798320011869]

# [[Journal:Acta Cryst D:S205979832001253X|Structure of a GH51 α-L-arabinofuranosidase from ''Meripilus giganteus'': Conserved Substrate Recognition from Bacteria to Fungi]], Nicholas G.S. McGregor, Johan P. Turkenburg, Kristian B. R. Mørkeberg Krogh, Jens Erik Nielsen, Marta Artola, Keith A. Stubbs, Herman S. Overkleeft and Gideon J. Davies [https://dx.doi.org/10.1107/S205979832001253X https://dx.doi.org/10.1107/S205979832001253X]

# [[Journal:Acta Cryst D:S2059798320013510|Influence of the presence of the heme cofactor on the JK-loop structure in indoleamine-2,3-dioxygenase-1]], Mirgaux Manon, Leherte Laurence and Wouters Johan [https://dx.doi.org/10.1107/S2059798320013510 https://dx.doi.org/10.1107/S2059798320013510]

# [[Journal:Acta Cryst D:S2059798320014540|Statistically correcting dynamical electron scattering improves refinement of protein nanocrystals, including charge refinement of coordinated metals]], Thorsten B. Blum, Dominique Housset, Max T.B. Clabbers, Eric van Genderen, Maria Bacia-Verloop, Ulrich Zander, Andrew A. McCarthy, Guy Schoehn, Wai Li Ling, Jan Pieter Abrahams [https://dx.doi.org/10.1107/S2059798320014540 https://dx.doi.org/10.1107/S2059798320014540]

# [[Journal:Acta Cryst D:S2059798320015004|The substrate binding in the bile acid transporter ASBT_Yf of ''Yersinia frederiksenii'']], Xiaodong Wang, Ying Lyu, Yujia Ji, Ziyi Sun and Xiaoming Zhou [https://dx.doi.org/10.1107/S2059798320015004 https://dx.doi.org/10.1107/S2059798320015004]

# [[Journal:Acta Cryst D:S205979832001517X|An engineered disulfide bridge traps and validates an outward-facing conformation in a bile acid transporter]], Xiaodong Wang, Ying Lyu, Yujia Ji, Ziyi Sun and Xiaoming Zhou [https://dx.doi.org/10.1107/S205979832001517X https://dx.doi.org/10.1107/S205979832001517X]

# [[Journal:Acta Cryst D:S2059798321003922|Structure of the human factor VIIa/soluble tissue factor with calcium, magnesium and rubidium]], K. Vadivel, A. E. Schmidt, D. Cascio, K. Padmanabhan, S. Krishnaswamy, H. Brandstetter and S. P. Bajaj [https://dx.doi.org/10.1107/S2059798321003922 https://dx.doi.org/10.1107/S2059798321003922]

# [[Journal:Acta Cryst D:S205979832100632X|Structure of the unique tetrameric STENOFOLIA homeodomain bound with promoter DNA]], Prabhat Kumar Pathak, Fei Zhang, Shuxia Peng, Lifang Niu, Juhi Chaturvedi, Justin Yoshida Elliott, Yan Xiang, Million Tadege, Junpeng Deng [https://dx.doi.org/10.1107/S205979832100632X https://dx.doi.org/10.1107/S205979832100632X]

# [[Journal:Acta Cryst D:S2059798321006628|Structure of a C1/C4-oxidizing AA9 lytic polysaccharide monooxygenase from the thermophilic fungus ''Malbranchea cinnamomea'']], Scott Mazurkewich, Andrea Seveso, Silvia Hüttner, Gisela Brändén, Johan Larsbrink [https://dx.doi.org/10.1107/S2059798321006628 https://dx.doi.org/10.1107/S2059798321006628]

# [[Journal:Acta Cryst D:S205979832100677X|A GH13 α-glucosidase from ''Weissella cibaria'' uncommonly acts on short-chain maltooligosaccharides]], Karan Wangpaiboon, Pasunee Laohawuttichai, Sun-Yong Kim, Tomoyuki Mori, Santhana Nakapong, Rath Pichyangkura, Piamsook Pongsawasdi, Toshio Hakoshima and Kuakarun Krusong [https://dx.doi.org/10.1107/S205979832100677X https://dx.doi.org/10.1107/S205979832100677X]

# [[Journal:Acta Cryst D:S2059798321008937|Structural and catalytic characterization of ''Blastochloris viridis'' and ''Pseudomonas aeruginosa'' homospermidine synthases supports the essential role of cation-''π'' interaction]], F. Helfrich and Axel J. Scheidig [https://www.ncbi.nlm.nih.gov/pubmed/34605434 https://www.ncbi.nlm.nih.gov/pubmed/34605434]

# [[Journal:Acta Cryst D:S2059798321009633|Structural insight into DNA recognition by bacterial transcriptional regulators of the SorC/DeoR family]], Marketa Soltysova, Irena Sieglova, Milan Fabry, Jirı Brynda, Jana Skerlova and Pavlına Rezacova [https://dx.doi.org/10.1107/S2059798321009633 https://dx.doi.org/10.1107/S2059798321009633]

# [[Journal:Acta Cryst D:S2059798322000948|A new inactive conformation of SARS-CoV-2 main protease]], Emanuele Fornasier, Maria Ludovica Macchia, Gabriele Giachin, Alice Sosic, Matteo Pavan, Mattia Sturlese, Cristiano Salata, Stefano Moro, Barbara Gatto, Massimo Bellanda and Roberto Battistutta [https://dx.doi.org/10.1107/S2059798322000948 https://dx.doi.org/10.1107/S2059798322000948]

# [[Journal:Acta Cryst D:S2059798322001772|Crystal structure of the putative cell wall lipoglycan biosynthesis protein LmcA from ''Mycobacterium smegmatis'']], Onisha Patel, Rajini Brammananth, Weiwen Dai, Santosh Panjikar, Ross L. Coppel, Isabelle S. Lucet and Paul K. Crellin [https://dx.doi.org/10.1107/S2059798322001772 https://dx.doi.org/10.1107/S2059798322001772]

# [[Journal:Acta Cryst D:S2059798322002157|The X-ray crystallography phase problem solved thanks to AlphaFold and RoseTTAFold models: a case study report]], Irène Barbarin-Bocahu, Marc Graille [https://dx.doi.org/10.1107/S2059798322002157 https://dx.doi.org/10.1107/S2059798322002157]

# [[Journal:Acta Cryst D:S2059798322003928|Racemic crystal structures of A-DNA duplexes]], Pradeep K. Mandal, Gavin W. Collie, Brice Kauffmann and Ivan Huc [https://dx.doi.org/10.1107/S2059798322003928 https://dx.doi.org/10.1107/S2059798322003928]

# [[Journal:Acta Cryst D:S2059798322004612|Structural Visualization of Transient Interactions Between the ''cis''-acting Acyltransferase and Acyl Carrier Protein of Salinomycin Modular Polyketide Synthase]], Y. Feng, F. Zhang, S. Huang, Z. Deng, L. Bai and J. Zheng [https://dx.doi.org/10.1107/S2059798322004612 https://dx.doi.org/10.1107/S2059798322004612]

# [[Journal:Acta Cryst D:S2059798322007082|Native glycosylation and binding of the anti-depressant paroxetine in a low-resolution crystal structure of human myeloperoxidase]], Lucas Krawczyk, Shubham Semwal, Jalal Soubhye, Salma Lemri Ouadriri, Martine Prévost, Pierre Van Antwerpen, Goedele Roos, & Julie Bouckaert [https://dx.doi.org/10.1107/S2059798322007082 https://dx.doi.org/10.1107/S2059798322007082]

# [[Journal:Acta Cryst D:S2059798322007677|Structural bases for the higher adherence to ACE2 conferred by the SARS-CoV-2 spike Q498Y substitution]], Elena Erausquin, Fabian Glaser, Juan Fernández-Recio, Jacinto López-Sagaseta [https://dx.doi.org/10.1107/S2059798322007677 https://dx.doi.org/10.1107/S2059798322007677]

# [[Journal:Acta Cryst D:S2059798322008373|Structural basis for the transformation of traditional medicine berberine by bacterial nitroreductase]], Hai-Ying Wen, Li-Bin Pan, Shu-Rong Ma, Xin-Yu Yang, Jia-Chun Hu, Hai-Fan Zhao, Zeng-Qiang Gao, Yu-Hui Dong, Jian-Dong Jiang, Yan Wang and Heng Zhang [https://dx.doi.org/10.1107/S2059798322008373 https://dx.doi.org/10.1107/S2059798322008373]

# [[Journal:Acta Cryst D:S2059798322009755|Structural and functional investigation of the human snRNP assembly factor AAR2 in complex with the PRPF8 RNaseH domain]], Marco Preussner, Karine F. Santos, Jonathan Alles, Christina Heroven, Florian Heyd, Markus C. Wahl, Gert Weber [https://dx.doi.org/10.1107/S2059798322009755 https://dx.doi.org/10.1107/S2059798322009755]

# [[Journal:Acta Cryst D:S2059798322010762|Structure of a hydrophobic leucinostatin derivative determined by host lattice display.]], Cedric Kiss, Flavio M. Gall, Birgit Dreier, Michael Adams, Rainer Riedl, Andreas Plückthun and Peer R. E. Mittl [https://dx.doi.org/10.1107/S2059798322010762 https://dx.doi.org/10.1107/S2059798322010762]

# [[Journal:Acta Cryst D:S2059798322011639|''Drosophila melanogaster'' Frataxin: Protein Crystal and Predicted Solution Structure with Identification of the Fe-Binding Regions]], Andria V. Rodrigues, Sharon Batelu, Tiara V. Hinton, John Rotondo, Lindsey Thompson, Joseph S. Brunzelle, Timothy L. Stemmler [https://dx.doi.org/10.1107/S2059798322011639 https://dx.doi.org/10.1107/S2059798322011639]

# [[Journal:Acta Cryst D:S205979832201186X|Structures of permuted halves of a modern ribose binding protein]], Florian Michel, Sooruban Shanmugaratnam, Sergio Romero-Romero, Birte Höcker [https://dx.doi.org/10.1107/S205979832201186X https://dx.doi.org/10.1107/S205979832201186X]

# [[Journal:Acta Cryst D:S2059798323004175|Structure-function studies of a novel laccase-like multicopper oxidase from ''Thermothelomyces thermophila'' provide insights into its biological role]], Christos Kosinas, Anastasia Zerva, Evangelos Topakas and Maria Dimarogona [https://dx.doi.org/10.1107/S2059798323004175 https://dx.doi.org/10.1107/S2059798323004175]

# [[Journal:Acta Cryst D:S2059798323006642|Atypical Homodimerisation Revealed by the Structure of (S)-Enantioselective Haloalkane Dehalogenase DmmarA from ''Mycobacterium marinum'']], Karolina Snajdarova, Sérgio M. Marques, Jiri Damborsky, David Bednar, Martin Marek [https://dx.doi.org/10.1107/S2059798323006642 https://dx.doi.org/10.1107/S2059798323006642]

# [[Journal:Acta Cryst D:S2059798323007672|The impact of molecular variants, crystallization conditions and the space group on ligand-protein complexes: A case study on bacterial phosphotriesterase]], Orly Dym, Nidhi Aggarwal, Yacov Ashani, Haim Leader, Shira Albeck, Tamar Unger, Shelly Hamer Rogotner, Israel Silman, Dan S. Tawfik and Joel L. Sussman [https://dx.doi.org/10.1107/S2059798323007672 https://dx.doi.org/10.1107/S2059798323007672]

# [[Journal:Acta Cryst D:S0907444911047251|Flexibility of the flap in the active site of BACE1 as revealed by crystal structures and molecular dynamics simulations]], Yechun Xu, Minjun Li, Harry Greenblatt, Wuyan Chen, Aviv Paz, Orly Dym, Yoav Peleg, Tiantian Chen, Xu Shen, Jianhua He, Hualiang Jiang, Israel Silman & Joel L Sussman [https://dx.doi.org/10.1107/S0907444911047251 https://dx.doi.org/10.1107/S0907444911047251]

=== Acta Cryst F ''Acta Crystallographica Section F: Structural Biology and Crystallization Communications'' ===

# [[Journal:Acta Cryst F:S1744309112003326|Structure of recombinant human carboxylesterase 1 isolated from whole cabbage looper larvae]], Harry M. Greenblatt, Tamara C. Otto, Melanie G. Kirkpatrick, Elena Kovaleva, Susan Brown, George Buchman, Douglas M. Cerasoli and Joel L. Sussman [https://dx.doi.org/10.1107/S1744309112003326 https://dx.doi.org/10.1107/S1744309112003326]

# [[Journal:Acta Cryst F:S1744309112050270|Crystal structure of ADL1, a plant-specific homologue of the universal diaminopimelate amino transferase enzyme of lysine biosynthesis]], Vladimir Sobolev, Marvin Edelman, Orly Dym, Tamar Unger, Shira Albeck, Menny Kirma and Gad Galili [https://www.ncbi.nlm.nih.gov/pubmed/23385743 https://www.ncbi.nlm.nih.gov/pubmed/23385743]

# [[Journal:Acta Cryst F:S2053230X18014814|Crystal structure and kinetic analyses of a hexameric form of (S)-3-hydroxybutyryl-CoA dehydrogenase from ''Clostridium acetobutylicum'']], Mihoko Takenoya, Seiichi Taguchi and Shunsuke Yajima [https://dx.doi.org/10.1107/S2053230X18014814 https://dx.doi.org/10.1107/S2053230X18014814]

# [[Journal:Acta Cryst F:S2053230X18016217|The structure of ''Mycobacterium tuberculosis'' HtrA reveals an auto-regulatory mechanism]], Arvind Kumar Gupta, Debashree Behera and Balasubramanian Gopal [https://dx.doi.org/10.1107/S2053230X18016217 https://dx.doi.org/10.1107/S2053230X18016217]

# [[Journal:Acta Cryst F:S2053230X18018083|An assessment of three human methylenetetrahydrofolate dehydrogenase/cyclohydrolase ligand complexes following further refinement]], Renata V. Bueno, Alice Dawson and William N. Hunter [https://dx.doi.org/10.1107/S2053230X18018083 https://dx.doi.org/10.1107/S2053230X18018083]

# [[Journal:Acta Cryst F:S2053230X19000815|Crystal structure of Type VI immunity protein Tdi1 (Atu4351) from ''Agrobacterium tumefaciens'']], Lingling Shi, Zengqiang Gao, Tianyi Zhang, Heng Zhang and Yuhui Dong [https://dx.doi.org/10.1107/S2053230X19000815 https://dx.doi.org/10.1107/S2053230X19000815]

# [[Journal:Acta Cryst F:S2053230X19001213|Substrate analogue complex structure of ''Mycobacterium tuberculosis'' decaprenyl diphosphate synthase]], Tzu-Ping Ko, Xiansha Xiao, Rey-Ting Guo, Jian-Wen Huang, Weidong Liu, Chun-Chi Chen [https://dx.doi.org/10.1107/S2053230X19001213 https://dx.doi.org/10.1107/S2053230X19001213]

# [[Journal:Acta Cryst F:S2053230X19002693|Crystal structure of phosphoribulokinase from ''Synechococcus sp.'' strain PCC 6301]], Robert Wilson, Manajit Hayer-Hartl and Andreas Bracher [https://dx.doi.org/10.1107/S2053230X19002693 https://dx.doi.org/10.1107/S2053230X19002693]

# [[Journal:Acta Cryst F:S2053230X19002863|Functional and structural characterization of IdnL7, an adenylation enzyme involved in incednine biosynthesis]], Jolanta Cieślak, Akimasa Miyanaga, Makoto Takaishi, Fumitaka Kudo, Tadashi Eguchi [https://dx.doi.org/10.1107/S2053230X19002863 https://dx.doi.org/10.1107/S2053230X19002863]

# [[Journal:Acta Cryst F:S2053230X19004151|Phasing with calcium at home]], Shuaiqi Guo, Robert Campbell, Peter L. Davies and John S. Allingham [https://dx.doi.org/10.1107/S2053230X19004151 https://dx.doi.org/10.1107/S2053230X19004151]

# [[Journal:Acta Cryst F:S2053230X19004424|Structure of the Ebola virus nucleoprotein - RNA complex]], Robert N. Kirchdoerfer, Erica Ollmann Saphire, Andrew B. Ward [https://dx.doi.org/10.1107/S2053230X19004424 https://dx.doi.org/10.1107/S2053230X19004424]

# [[Journal:Acta Cryst F:S2053230X19004618|Novel T9 loop interaction of Filamenting Temperature-sensitive mutant Z from ''Mycobacterium tuberculosis'']], E. O. Lazo, J. Jakoncic, S. RoyChowdhury, D. Awasthi, I. Ojima [https://dx.doi.org/10.1107/S2053230X19004618 https://dx.doi.org/10.1107/S2053230X19004618]

# [[Journal:Acta Cryst F:S2053230X19007192|Crystal Structure of Flavin Dependent Thymidylate Synthase, Thy1, from ''Thermus thermophilus'' having an Extra C Terminal Domain]], A. Ogawa, G. Sampei and G. Kawai [https://dx.doi.org/10.1107/S2053230X19007192 https://dx.doi.org/10.1107/S2053230X19007192]

# [[Journal:Acta Cryst F:S2053230X20000199|Structure of MP-4 from ''Mucuna pruriens'' at 2.22 Å resolution]], Abha Jain, Amit Kumar, Meha Shikhi, Ashish Kumar, Deepak T. Nair and Dinakar M. Salunke [https://dx.doi.org/10.1107/S2053230X20000199 https://dx.doi.org/10.1107/S2053230X20000199]

# [[Journal:Acta Cryst F:S2053230X20002988|Structural characterization of the human O-phosphoethanolamine phospho-lyase]], Chiara Vettraino, Alessio Peracchi, Stefano Donini, Emilio Parisini [https://dx.doi.org/10.1107/S2053230X20002988 https://dx.doi.org/10.1107/S2053230X20002988]

# [[Journal:Acta Cryst F:S2053230X20004343|Structure of ''Mycobacterium smegmatis'' α-maltose-1-phosphate synthase GlgM]], Karl Syson, Clare E. M. Stevenson, David M. Lawson and Stephen Bornemann [https://dx.doi.org/10.1107/S2053230X20004343 https://dx.doi.org/10.1107/S2053230X20004343]

# [[Journal:Acta Cryst F:S2053230X20010122|Crystal structure of the extracellular domain of the receptor-like kinase TMK3 from ''Arabidopsis thaliana'']], Hong Chen, Yanqiong Kong, Jia Chen, Lan Li, Xiushan Li, Feng Yu, Zhenhua Ming [https://dx.doi.org/10.1107/S2053230X20010122 https://dx.doi.org/10.1107/S2053230X20010122]

# [[Journal:Acta Cryst F:S2053230X20010237|High-resolution structure of alcohol dehydrogenase from the bifunctional bacterial enzyme AdhE]], Liyana Azmi, Eilis C. Bragginton, Ian T. Cadby, Olwyn Byron, Andrew J. Roe, Andrew L. Lovering and Mads Gabrielsen [https://dx.doi.org/10.1107/S2053230X20010237 https://dx.doi.org/10.1107/S2053230X20010237]

# [[Journal:Acta Cryst F:S2053230X20011309|Multiple crystal forms of human MacroD2]], Sarah Wazir, Mirko M. Maksimainen and Lari Lehtiö [https://dx.doi.org/10.1107/S2053230X20011309 https://dx.doi.org/10.1107/S2053230X20011309]

# [[Journal:Acta Cryst F:S2053230X20011310|Crystallization and structure of ebselen bound to cysteine 141 of human inositol monophosphatase (IMPase).]], Gareth D. Fenn, Helen Waller-Evans, John R. Atack and Benjamin D. Bax [https://dx.doi.org/10.1107/S2053230X20011310 https://dx.doi.org/10.1107/S2053230X20011310]

# [[Journal:Acta Cryst F:S2053230X20016015|Using Yeast Surface Display to Engineer a Soluble and Crystallizable Construct of HPK1]], Wai L. Lau, Bradley Pearce, Heather Malakian, Iyoncy Rodrigo, Dianlin Xie, Mian Gao, Frank Marsilio, Chiehying Chang, Max Ruzanov, Jodi K. Muckelbauer, John A. Newitt, Dasa Lipovsek and Steven Sheriff [https://dx.doi.org/10.1107/S2053230X20016015 https://dx.doi.org/10.1107/S2053230X20016015]

# [[Journal:Acta Cryst F:S2053230X21008542|Glycogen phosphorylase revisited: extending the resolution of the R- and T-state structures of the free enzyme and in complex with allosteric activators]], Demetres D. Leonidas, Spyros E. Zographos, Katerina E. Tsitsanou, Vasiliki T. Skamnaki, George Stravodimos, and Efthimios Kyriakis [https://dx.doi.org/10.1107/S2053230X21008542 https://dx.doi.org/10.1107/S2053230X21008542]

# [[Journal:Acta Cryst F:S2053230X21008761|Complex structure of acyltransferase VinK and carrier protein VinL with a pantetheine cross-linking probe]], Akimasa Miyanaga, Risako Ouchi, Fumitaka Kudo and Tadashi Eguchi [https://dx.doi.org/10.1107/S2053230X21008761 https://dx.doi.org/10.1107/S2053230X21008761]

# [[Journal:Acta Cryst F:S2053230X21008967|Microcrystal preparation for serial femtosecond X-ray crystallography of bacterial copper amine oxidase]], Takeshi Murakawa, Mamoru Suzuki, Toshi Arima, Michihiro Sugahara, Tomoyuki Tanaka, Rie Tanaka, So Iwata, Eriko Nango, Kensuke Tono, Hideyuki Hayashi, Kenji Fukui, Takato Yano, Katsuyuki Tanizawa, and Toshihide Okajima [https://dx.doi.org/10.1107/S2053230X21008967 https://dx.doi.org/10.1107/S2053230X21008967]

# [[Journal:Acta Cryst F:S2053230X21012632|Crystal structure of a putative short-chain dehydrogenase/reductase from ''Paraburkholderia xenovorans'']], Jayson Davidson, Kyndall Nicholas, Jeremy Young, Deborah G. Conrady, Stephen Mayclin, Sandhya Subramanian, Bart L. Staker, Peter J. Myler and Oluwatoyin A. Asojo [https://dx.doi.org/10.1107/S2053230X21012632 https://dx.doi.org/10.1107/S2053230X21012632]

# [[Journal:Acta Cryst F:S2053230X21013455|Crystal structure of betaine aldehyde dehydrogenase from ''Burkholderia pseudomallei'']], Dylan K. Beard, Sandhya Subramanian, Jan Abendroth, Thomas E. Edwards, Peter J. Myler, and Oluwatoyin A. Asojo [https://dx.doi.org/10.1107/S2053230X21013455 https://dx.doi.org/10.1107/S2053230X21013455]

# [[Journal:Acta Cryst F:S2053230X21013595|Crystal structure of a hypothetical protein from ''Giardia lamblia'']], Dylan Beard, Seonna Bristol, Kayla Cosby, Amber Davis, Courtney Manning, Lionel Perry, Lauren Snapp, Arian Toy, Kayla Wheeler, Jeremy Young, Bart L Staker, David Dranow, Jan Abendroth, Sandhya Subramanian, Thomas E Edwards, Peter J Myler, and Oluwatoyin A. Asojo [https://dx.doi.org/10.1107/S2053230X21013595 https://dx.doi.org/10.1107/S2053230X21013595]

# [[Journal:Acta Cryst F:S2053230X22002448|Structure and activity of a thermally stable mutant of Acanthamoeba Actophorin]], Stephen Quirk and Raquel Lieberman [https://dx.doi.org/10.1107/S2053230X22002448 https://dx.doi.org/10.1107/S2053230X22002448]

# [[Journal:Acta Cryst F:S2053230X22006586|Crystal structure determination of the halogenase CtcP from ''Streptomyces aureofaciens'']], Lijuan Yin [https://dx.doi.org/10.1107/S2053230X22006586 https://dx.doi.org/10.1107/S2053230X22006586]

# [[Journal:Acta Cryst F:S2053230X22007555|Crystal structures of glutamyl-tRNA synthetase from ''Elizabethkingia anopheles'' and ''E. meningosepticum'']], Lauryn Brooks, Sandhya Subramanian, David M. Dranow, Stephen J. Mayclin, Peter J. Myler, and Oluwatoyin A. Asojo [https://dx.doi.org/10.1107/S2053230X22007555 https://dx.doi.org/10.1107/S2053230X22007555]

# [[Journal:Acta Cryst F:S2053230X23003801|Bacterial Structural Genomics Target Enabled by Recently Discovered Potent Fungal ACS Inhibitor]], Nicholas D. DeBouver, Madison J. Bolejack, Taiwo E. Esan, Damian J. Krysan, Timothy J. Hagen, Jan Abendroth [https://dx.doi.org/10.1107/S2053230X23003801 https://dx.doi.org/10.1107/S2053230X23003801]

# [[Journal:Acta Cryst F:S2053230X23004430|Crystal structure of thermostable acetaldehyde dehydrogenase from the hyperthermophilic archaeon, ''Sulfolobus tokodaii'']], Shohei Mine, Makoto Nakabayashi and Kazuhiko Ishikawa [https://dx.doi.org/10.1107/S2053230X23004430 https://dx.doi.org/10.1107/S2053230X23004430]

# [[Journal:Acta Cryst F:S2053230X23006817|Drastic alterations in the loop structure around colchicine upon complex formation with an engineered lipocalin indicate a conformational selection mechanism]], Elena Jerschke, Andreas Eichinger and Arne Skerra [https://dx.doi.org/10.1107/S2053230X23006817 https://dx.doi.org/10.1107/S2053230X23006817]

=== Angew Chem Int Ed '' '' ===

# [[Journal:Angew Chem Int Ed:1|Fine tuning of chlorophyll spectra by protein-induced ring deformation]], Dominika Bednarczyk, Orly Dym, Yoav Peleg, Vadivel Prabahar, and Dror Noy [https://www.ncbi.nlm.nih.gov/pubmed/27098554 https://www.ncbi.nlm.nih.gov/pubmed/27098554]

=== BAMBEd ''Biochemistry and Molecular Biology Education'' ===

# [[Journal:BAMBEd:Phosphoinositide 3-kinase|Phosphoinositide 3‐kinase]], David Canner [https://dx.doi.org/10.1002/bmb.20540 https://dx.doi.org/10.1002/bmb.20540]

# [[Journal:BAMBEd:3D visualization and annotation of transcription factor-DNA readout modes|3D visualization and annotation of transcription factor–DNA readout modes]], Ana Carolina Dantas Machado, Skyler B. Saleebyan, Bailey T. Holmes, Maria Karelina, Julia Tam, Sharon Y. Kim, Keziah H. Kim, Iris Dror, Eran Hodis, Eric Martz, Patricia A. Compeau, Remo Rohs [https://dx.doi.org/10.1002/bmb.20650 https://dx.doi.org/10.1002/bmb.20650]

# [[Journal:BAMBEd:The large ribosomal subunit of Haloarcula marismortui|The large ribosomal subunit of ''Haloarcula marismortui'']], Wayne A. Decatur [https://dx.doi.org/10.1002/bmb.20444 https://dx.doi.org/10.1002/bmb.20444]

# [[Journal:BAMBEd:Ramachandran plots|Ramachandran plots]], Karl Oberholser [https://dx.doi.org/10.1002/bmb.20457 https://dx.doi.org/10.1002/bmb.20457]

# [[Journal:BAMBEd:HMG-CoA reductase|HMG‐CoA reductase]], David Canner [https://dx.doi.org/10.1002/bmb.20481 https://dx.doi.org/10.1002/bmb.20481]

# [[Journal:BAMBEd:Deoxyribonucleic Acid (DNA)|Deoxyribonucleic Acid (DNA)]], Adithya Sagar, Karl Oberholser [https://dx.doi.org/10.1002/bmb.20566 https://dx.doi.org/10.1002/bmb.20566]

# [[Journal:BAMBEd:Bovine pancreatic ribonuclease a|Bovine pancreatic ribonuclease a]], R. Jeremy Johnson, Mary Andorfer, Ashton Chaffee, Melanie Clark, Nathan Clarke, Grace Douglass, Elizabeth Ellis, Emily Fischer, Carissa Fuller, Lauren Garnett, Lexi Gehring, Laurel Heckman, Daniel Kroupa, Lin Liu, Deanna Proimos, Micah Raebel, Kristyn Shaw, Michael Slack, Diana Trautmann, Ben Trefilek [https://dx.doi.org/10.1002/bmb.20568 https://dx.doi.org/10.1002/bmb.20568]

# [[Journal:BAMBEd:Acetylcholinesterase: Substrate Traffic and Inhibition|Acetylcholinesterase: Substrate traffic and inhibition]], Mary G. Acheampong, Daviana E. Dueño, Bobby K. Glover, Alafia A. Henry, Randol Mata, Marisa L. VanBrakle, Lars F. Westblade, Joel L. Sussman, Allison L. Granberry [https://dx.doi.org/10.1002/bmb.20604 https://dx.doi.org/10.1002/bmb.20604]

# [[Journal:BAMBEd:Beta-prime subunit of bacterial RNA polymerase|Beta‐prime subunit of bacterial RNA polymerase]], Catherine Louise Dornfeld, Mark Hoelzer, Steven Forst [https://dx.doi.org/10.1002/bmb.20630 https://dx.doi.org/10.1002/bmb.20630]

# [[Journal:BAMBEd:How do we get the oxygen we breathe|Tutorial: How we get the oxygen we breathe]], Jaime Prilusky, Eran Hodis [https://dx.doi.org/10.1002/bmb.20646 https://dx.doi.org/10.1002/bmb.20646]

# [[Journal:BAMBEd:Ricin|Ricin]], Ann Taylor [https://dx.doi.org/10.1002/bmb.20716 https://dx.doi.org/10.1002/bmb.20716]

# [[Journal:BAMBEd:Coiled-coil structure of keratins|Coiled‐coil structure of keratins]], Israel Hanukoglu, Liora Ezra [https://dx.doi.org/10.1002/bmb.20746 https://dx.doi.org/10.1002/bmb.20746]

=== BMC ''Bioorganic & Medicinal Chemistry'' ===

# [[Journal:BMC:3|Identification of novel isocytosine derivatives as xanthine oxidase inhibitors from a set of virtual screening hits]], Chandrika B-Rao, Asha Kulkarni-Almeida, Kamlesh V. Katkar, Smriti Khanna, Usha Ghosh, Ashish Keche, Pranay Shah, Ankita Srivastava, Vaidehi Korde, Kumar V. S. Nemmani, Nitin J. Deshmukh, Amol Dixit, Manoja K. Brahma, Umakant Bahirat, Lalit Doshi, Rajiv Sharma, H. Sivaramakrishnan [https://www.ncbi.nlm.nih.gov/pubmed/22483591 https://www.ncbi.nlm.nih.gov/pubmed/22483591]

=== CHEMBIOINT ''Chemico-Biological Interactions'' ===

# [[Journal:CHEMBIOINT:1|The four-helix bundle in cholinesterase dimers: structural and energetic determinants of stability]], Dana A. Novichkova, Sofya V. Lushchekina, Orly Dym, Patrick Masson, Israel Silman and Joel L. Sussman [https://dx.doi.org/10.1016/j.cbi.2019.06.012 https://dx.doi.org/10.1016/j.cbi.2019.06.012]

# [[Journal:CHEMBIOINT:2|Molecular Dynamics Simulations of the Interaction of Mouse and ''Torpedo'' Acetylcholinesterase with Covalent Inhibitors Explain Their Differential Reactivity: Implications for Drug Design]], Nellore Bhanu Chandar, Irena Efremenko, Israel Silman, Jan M. L. Martin, and Joel L. Sussman [https://dx.doi.org/https://doi.org/10.1016/j.cbi.2019.06.028 https://dx.doi.org/https://doi.org/10.1016/j.cbi.2019.06.028]

=== Cell '' '' ===

# [[Journal:Cell:1|Structural linkage between ligand discrimination and receptor activation by type I interferons]], Christoph Thomas, Ignacio Moraga, Doron Levin, Peter O. Krutzik, Yulia Podoplelova, Angelica Trejo, Choongho Lee, Ganit Yarden, Susan E. Vleck, Jeffrey S. Glenn, Garry P. Nolan, Jacob Piehler, Gideon Schreiber, K. Christopher Garcia [https://dx.doi.org/10.1016/j.cell.2011.06.048 https://dx.doi.org/10.1016/j.cell.2011.06.048]

=== FEBS Journal '' '' ===

# [[Journal:FEBS Journal:1|Flexible regions govern promiscuous binding of IL-24 to receptors IL-20R1 and IL-22R1]], Jiří Zahradník, Lucie Kolářová, Yoav Peleg, Petr Kolenko, Silvie Svidenská, Tatsiana Charnavets, Tamar Unger, Joel L. Sussman, and Bohdan Schneider [https://www.ncbi.nlm.nih.gov/pubmed/31152679 https://www.ncbi.nlm.nih.gov/pubmed/31152679]

=== FEBS Open Bio '' '' ===

# [[Journal:FEBS Open Bio:1|Crystal structure of the essential biotin-dependent carboxylase AccA3 from ''Mycobacterium tuberculosis'']], Matthew Bennett, Martin Högbom [https://www.ncbi.nlm.nih.gov/pubmed/28469974 https://www.ncbi.nlm.nih.gov/pubmed/28469974]

# [[Journal:FEBS Open Bio:2|Structural evidence for Arabidopsis glutathione transferase AtGSTF2 functioning as a transporter of small organic ligands]], Laziana Ahmad, Elizabeth L. Rylott, Neil C. Bruce, Robert Edwards and Gideon Grogan [https://www.ncbi.nlm.nih.gov/pubmed/28174680 https://www.ncbi.nlm.nih.gov/pubmed/28174680]

=== FLS ''Frontiers in Life Science'' ===

# [[Journal:FLS:1|Crystal structure of porcine pancreatic phospholipase A₂ in complex with 2-methoxycyclohexa-2-5-diene-1,4-dione]], K. V. Dileep, I. Tintu, P. K. Mandal, P. Karthe, M. Haridas and C. Sadasivan [https://dx.doi.org/10.1080/21553769.2012.689262 https://dx.doi.org/10.1080/21553769.2012.689262]

=== Genes '' '' ===

# [[Journal:Genes:1|A DNA Structural Alphabet Distinguishes Structural Features of DNA Bound to Regulatory Proteins and in the Nucleosome Core Particle]], Bohdan Schneider, Paulina Bozikova, Petr Cech, Daniel Svozil and Jiri Cerny [https://dx.doi.org/10.3390/genes8100278 https://dx.doi.org/10.3390/genes8100278]

=== IUCrJ '' '' ===

# [[Journal:IUCrJ:S2052252518018274|A cytosine modification mechanism revealed by the ternary complex structure of deoxycytidylate hydroxymethylase from bacteriophage T4 with its cofactor and substrate]], Si Hoon Park, Se Won Suh and Hyun Hyu Song [https://dx.doi.org/10.1107/S2052252518018274 https://dx.doi.org/10.1107/S2052252518018274]

# [[Journal:IUCrJ:S2052252519001568|Structure of mammalian plasma fetuin-B and its mechanism of selective metallopeptidase inhibition]], Anna Cuppari, Hagen Körschgen, Dirk Fahrenkamp, Carlo Schmitz, Tibisay Guevara, Konstantin Karmilin, Michael Kuske, Mario Olf, Eileen Dietzel, Irene Yiallouros, Daniele de Sanctis, Theodoros Goulas, Ralf Weiskirchen, Willi Jahnen-Dechent, Julia Floehr, Walter Stöcker, Luca Jovine and F. Xavier Gomis-Rüth [https://dx.doi.org/10.1107/S2052252519001568 https://dx.doi.org/10.1107/S2052252519001568]

# [[Journal:IUCrJ:S2052252519002926|Determination of the Molecular Basis for Coprogen Import by Gram Negative Bacteria]], Rhys Grinter and Trevor Lithgow [https://dx.doi.org/10.1107/S2052252519002926 https://dx.doi.org/10.1107/S2052252519002926]

# [[Journal:IUCrJ:S2052252519005372|The structural characterisation of a glucosylglycerate hydrolase provides insights into the molecular mechanism of mycobacterial recovery from nitrogen starvation]], Tatiana Barros Cereija, Susana Alarico, Eva C. Lourenço, José António Manso, M. Rita Ventura, Nuno Empadinhas, Sandra Macedo-Ribeiro and Pedro José Barbosa Pereira [https://dx.doi.org/10.1107/S2052252519005372 https://dx.doi.org/10.1107/S2052252519005372]

# [[Journal:IUCrJ:S205225251901707X|Structural insights into conformational switching in latency-associated peptide between TGFβ-1 bound and unbound states]], Timothy R. Stachowski, Mary E. Snell, and Edward H. Snell [https://dx.doi.org/10.1107/S205225251901707X https://dx.doi.org/10.1107/S205225251901707X]

# [[Journal:IUCrJ:S205225252000072X|Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals]], Alexander M. Wolff, Iris D. Young, Raymond G. Sierra, Aaron S. Brewster, Michael W. Martynowycz, Eriko Nango, Michihiro Sugahara, Takanori Nakane, Kazutaka Ito, Andrew Aquila, Asmit Bhowmik, Justin T. Biel, Sergio Carbajo, Aina E. Cohen, Saul Cortez, Ana Gonzalez, Tomoya Hino, Dohyun Im, Jake D. Koralek, Minoru Kubo, Tomas S. Lazarou, Takashi Nomura, Shigeki Owada, Avi J. Samelson, Tomoyuki Tanaka, Rie Tanaka, Erin M. Thompson, Henry van den Bedem, Rahel A. Woldeyes, Fumiaki Yumoto, Wei Zhao, Kensuke Tono, Sébastien Boutet, So Iwata, Tamir Gonen, Nicholas K. Sauter, James S. Fraser, Michael C. Thompson [https://dx.doi.org/10.1107/S205225252000072X https://dx.doi.org/10.1107/S205225252000072X]

# [[Journal:IUCrJ:S2052252520001840|Structure of the MICU1-MICU2 heterodimer provides insights into the gatekeeping threshold shift]], Jongseo Park, Youngjin Lee, Taein Park, Jung Youn Kang, Sang A. Mun, Minwoo Jin, Jihyeong Yang and Soo Hyun Eom [https://dx.doi.org/10.1107/S2052252520001840 https://dx.doi.org/10.1107/S2052252520001840]

# [[Journal:IUCrJ:S2052252520005709|Structural Definition of Polyspecific Compensatory Ligand Recognition by P-glycoprotein]], Christina A. Le, Daniel S. Harvey and Stephen G. Aller [https://dx.doi.org/10.1107/S2052252520005709 https://dx.doi.org/10.1107/S2052252520005709]

# [[Journal:IUCrJ:S2052252520011008|Structural insights into the effect of active site mutation on carbonic anhydrase catalytic mechanism]], Jin Kyun Kim, Cheol Lee, Seon Woo Lim, Jacob T. Andring, Aniruddha Adhikari, Robert McKenna and Chae Un Kim [https://dx.doi.org/10.1107/S2052252520011008 https://dx.doi.org/10.1107/S2052252520011008]

# [[Journal:IUCrJ:S2052252521005340|X-ray crystallography studies of RoAb13 bound to PIYDIN, a part of the CCR5 N-terminal domain]], Lata Govada, Emmanuel Saridakis, Sean C. Kassen, Ahmad Bin-Ramzi, Rhodri Marc Morgan, Benjamin Chain, John R. Helliwell and Naomi E. Chayen [https://dx.doi.org/10.1107/S2052252521005340 https://dx.doi.org/10.1107/S2052252521005340]

# [[Journal:IUCrJ:S2052252521008125|Observation of Substrate Diffusion and Ligand Binding in Enzyme Crystals using High Repetition Rate Mix-and-Inject Serial Crystallography]], Suraj Pandey, George Calvey, Andrea M. Katz, Tek Narsingh Malla, Faisal H. M. Koua, Jose M. Martin-Garcia, Ishwor Poudyal, Jay-How Yang, Mohammad Vakili, Oleksandr Yefanov, Kara A. Zielinski, Saša Bajt, Salah Awel, Katerina Dörner, Matthias Frank, Luca Gelisio, Rebecca Jernigan, Henry Kirkwood, Marco Kloos, Jayanath Koliyadu, Valerio Mariani, Mitchell D. Miller, Grant Mills, Garrett Nelson, Jose L. Olmos Jr., Alireza Sadri, Tokushi Sato, Alexandra Tolstikova, Weijun Xu, Abbas Ourmazd, John H. C. Spence, Peter Schwander, Anton Barty, Henry N. Chapman, Petra Fromme, Adrian P. Mancuso, George N. Phillips Jr., Richard Bean, Lois Pollack, Marius Schmidt [https://dx.doi.org/10.1107/S2052252521008125 https://dx.doi.org/10.1107/S2052252521008125]

# [[Journal:IUCrJ:S2052252521011696|Crystal structures of PigF, an O-methyltransferase involved in prodigiosin-synthetic pathway, reveal an induce-fit substrates recognition mechanism]], Shenshen Qiu, Dongqing Xu, Mengxue Xu, Huan Zhou, Ning Sun, Li Zhang, Mengmeng Zhao, Jianhua He, Tingting Ran, Bo Sun and Weiwu Wang [https://dx.doi.org/10.1107/S2052252521011696 https://dx.doi.org/10.1107/S2052252521011696]

# [[Journal:IUCrJ:S2052252522006820|Organism Specific Differences in Binding of Ketoprofen to Serum Albumin]], Mateusz P. Czub, Alan J. Stewart, Ivan G. Shabalin, and Wladek Minor [https://dx.doi.org/10.1107/S2052252522006820 https://dx.doi.org/10.1107/S2052252522006820]

# [[Journal:IUCrJ:S2052252522007497|The temperature-dependent conformational ensemble of SARS-CoV-2 main protease (Mpro)]], Ali Ebrahim, Blake T. Riley, Desigan Kumaran, Babak Andi, Martin R. Fuchs, Sean McSweeneyd, and Daniel A. Keedy [https://dx.doi.org/10.1107/S2052252522007497 https://dx.doi.org/10.1107/S2052252522007497]

=== JBIC ''Journal of Biological Inorganic Chemistry'' ===

# [[Journal:JBIC:1|Crystal structure of the zinc, cobalt and iron containing adenylate kinase from ''Desulfovibrio gigas'': a novel metal containing adenylate kinase from Gram-negative bacteria]], A. Mukhopadhyay, A.V. Kladova, S.A. Bursakov, O. Yu. Gavel, J.J. Calvete, V.L. Shnyrov, I. Moura, J.J.G. Moura, M.J. Romão, J. Trincão [https://dx.doi.org/10.1007/s00775-010-0700-8 https://dx.doi.org/10.1007/s00775-010-0700-8]

# [[Journal:JBIC:2|Structure of Anticancer Ruthenium Half-Sandwich Complex Bound to Glycogen Synthase Kinase 3ß]], G. Atilla-Gocumen, L. Di Costanzo, E. Meggers [https://dx.doi.org/10.1007/s00775-010-0699-x https://dx.doi.org/10.1007/s00775-010-0699-x]

# [[Journal:JBIC:3|Structural characterization of human S100A16, a low-affinity calcium binder]], Elena Babini • Ivano Bertini • Valentina Borsi • Vito Calderone • Xiaoyu Hu • Claudio Luchinat • Giacomo Parigi [https://dx.doi.org/10.1007/s00775-010-0721-3 https://dx.doi.org/10.1007/s00775-010-0721-3]

# [[Journal:JBIC:4|Bacterial ferrochelatase turns human: Tyr13 determines the apparent metal specificity of ''Bacillus subtilis'' ferrochelatase]], Mattias D. Hansson • Tobias Karlberg • Christopher A. G. So ̈derberg • Sreekanth Rajan • Martin J. Warren • Salam Al-Karadaghi • Stephen E. J. Rigby • Mats Hansson [https://dx.doi.org/10.1007/s00775-010-0720-4 https://dx.doi.org/10.1007/s00775-010-0720-4]

# [[Journal:JBIC:5|A Hyperactive Cobalt-Substituted Extradiol-Cleaving Catechol Dioxygenase]], Andrew J. Fielding, Elena G. Kovaleva, Erik R. Farquhar, John D. Lipscomb and Lawrence Que [https://dx.doi.org/10.1007/s00775-010-0732-0 https://dx.doi.org/10.1007/s00775-010-0732-0]

# [[Journal:JBIC:6|Sco Proteins are Involved in Electron Transfer Processes]], Lucia Banci, Ivano Bertini, Simone Ciofi-Baffoni, Tatiana Kozyreva, Mirko Mori and Shenlin Wang [https://dx.doi.org/10.1007/s00775-010-0735-x https://dx.doi.org/10.1007/s00775-010-0735-x]

# [[Journal:JBIC:7|Structural and kinetic studies of imidazole binding to two members of the cytochrome c6 family reveal an important role for a conserved heme pocket residue]], Badri S. Rajagopal, Michael T. Wilson, Derek S. Bendall, Christopher J. Howe and Jonathan A.R. Worrall [https://dx.doi.org/10.1007/s00775-011-0758-y https://dx.doi.org/10.1007/s00775-011-0758-y]

# [[Journal:JBIC:8|A hydrogen-bonding network formed by the B10-E7-E11 residues of a truncated hemoglobin from Tetrahymena pyriformis is critical for stability of bound oxygen and nitric oxide detoxification]], Jotaro Igarashi, Kazuo Kobayashi and Ariki Matsuoka [https://dx.doi.org/10.1007/s00775-011-0761-3 https://dx.doi.org/10.1007/s00775-011-0761-3]

# [[Journal:JBIC:9|Protein and metal cluster structure of the wheat metallothionein domain γ-Ec-1. The second part of the puzzle.]], Jens Loebus, Estevão A. Peroza, Nancy Blüthgen, Thomas Fox, Wolfram Meyer Klaucke, Oliver Zerbe and Eva Freisinger [https://dx.doi.org/10.1007/s00775-011-0770-2 https://dx.doi.org/10.1007/s00775-011-0770-2]

# [[Journal:JBIC:10|Crystal structures of the all cysteinyl coordinated D14C variant of ''Pyrococcus furiosus'' ferredoxin: [4Fe-4S] <-> [3Fe-4S] cluster conversion]], Monika Nøhr Løvgreen, Maja Martic, Michael S. Windahl, Hans E. M. Christensen and Pernille Harris [https://dx.doi.org/10.1007/s00775-011-0778-7 https://dx.doi.org/10.1007/s00775-011-0778-7]

# [[Journal:JBIC:11|{{nowrap|A Cryo-Crystallographic}} Time Course for Peroxide Reduction by Rubrerythrin from ''Pyrococcus furiosus'']], Bret Dillard, Jonathan Demick, Michael Adams and William Lanzilotta [https://dx.doi.org/10.1007/s00775-011-0795-6 https://dx.doi.org/10.1007/s00775-011-0795-6]

# [[Journal:JBIC:12|ISC-like [2Fe-2S] ferredoxin (FdxB) dimer from ''Pseudomonas putida'' JCM 20004: Structural and electron nuclear double resonance characterization]], Toshio Iwasaki, Reinhard Kappl, Gerhard Bracic, Nobutaka Shimizu, Daijiro Ohmori and Takashi Kumasaka [https://dx.doi.org/10.1007/s00775-011-0793-8 https://dx.doi.org/10.1007/s00775-011-0793-8]

# [[Journal:JBIC:13|{{nowrap|N-Butylisocyanide Oxidation}} at the {{nowrap|&#91;NiFe₄S₄OH_x&#93;-cluster}} of CO Dehydrogenase]], Jae-Hun Jeoung and Holger Dobbek [https://dx.doi.org/10.1007/s00775-011-0839-y https://dx.doi.org/10.1007/s00775-011-0839-y]

# [[Journal:JBIC:14|Multifaceted SlyD from ''Helicobacter pylori'': implication in [NiFe] hydrogenase maturation]], Tianfan Cheng, Hongyan Li, Wei Xia and Hongzhe Sun [https://dx.doi.org/10.1007/s00775-011-0855-y https://dx.doi.org/10.1007/s00775-011-0855-y]

# [[Journal:JBIC:15|Potent Inhibition of Dinuclear Zinc(II) Peptidase, an Aminopeptidase from Aeromonas proteolytica, by 8-Quinolinol Derivatives: Inhibitor Design Based on Zn2+ Fluorophores, Kinetic, and X-ray Crystallographic Study]], Kengo Hanaya, Miho Suetsugu, Shinya Saijo, Ichiro Yamato, and Shin Aoki [https://dx.doi.org/10.1007/s00775-012-0873-4 https://dx.doi.org/10.1007/s00775-012-0873-4]

# [[Journal:JBIC:16|Laue Crystal Structure of ''Shewanella oneidensis'' Cytochrome c Nitrite Reductase from a High-yield Expression System]], Matthew Youngblut, Evan T. Judd, Vukica Srajer, Bilal Sayyed, Tyler Goelzer, Sean J. Elliott, Marius Schmidt and A. Andrew Pacheco [https://dx.doi.org/10.1007/s00775-012-0885-0 https://dx.doi.org/10.1007/s00775-012-0885-0]

# [[Journal:JBIC:17|Peptidylglycine α-Hydroxylating Monooxygenase (PHM)-coordination of peroxide to Cu_M center. Structural and computational study]], Katarzyna Rudzka, Diego M. Moreno, Betty Eipper, Richard Mains, Dario A. Estrin and L. Mario Amzel, [https://dx.doi.org/10.1007/s00775-012-0967-z https://dx.doi.org/10.1007/s00775-012-0967-z]

# [[Journal:JBIC:18|Solution structure and dynamics of human S100A14]], Ivano Bertini, Valentina Borsi, Linda Cerofolini, Soumyasri Das Gupta, Marco Fragai and Claudio Luchinat [https://www.ncbi.nlm.nih.gov/pubmed/23197251 https://www.ncbi.nlm.nih.gov/pubmed/23197251]

# [[Journal:JBIC:19|Heterometallic [AgFe₃S₄] ferredoxin variants – synthesis, characterization and the first crystal structure of an engineered heterometallic iron-sulfur protein]], Maja Martic, Ida Noémi Jakab-Simon, Lærke Tvedebrink Haahr, Wilfred Raymond Hagen and Hans Erik Mølager Christensen [https://www.ncbi.nlm.nih.gov/pubmed/23296387 https://www.ncbi.nlm.nih.gov/pubmed/23296387]

# [[Journal:JBIC:20|The crystal structure of ''Sporosarcina pasteurii'' urease in a complex with citrate provides new hints for inhibitor design]], Stefano Benini, Paulina Kosikowska, Michele Cianci, Luca Mazzei, Antonio Gonzalez Vara, Łukasz Berlicki, and Stefano Ciurli [https://www.ncbi.nlm.nih.gov/pubmed/23412551 https://www.ncbi.nlm.nih.gov/pubmed/23412551]

# [[Journal:JBIC:21|The mechanism of copper uptake by tyrosinase from ''Bacillus megaterium'']], Margarita Kanteev, Mor Goldfeder, Michał Chojnacki, Noam Adir, and Ayelet Fishman [https://dx.doi.org/10.1007/s00775-013-1034-0 https://dx.doi.org/10.1007/s00775-013-1034-0]

# [[Journal:JBIC:22|The crystal structure of an extracellular catechol oxidase from the ascomycete fungus <i>Aspergillus oryzae</i>]], Nina Hakulinen, Chiara Gasparetti, Heidi Kaljunen, Kristiina Kruus, and Juha Rouvinen [https://dx.doi.org/10.1007/s00775-013-1038-9 https://dx.doi.org/10.1007/s00775-013-1038-9]

# [[Journal:JBIC:23|Selectivity of Ni(II) and Zn(II) binding to ''Sporosarcina pasteurii'' UreE, a metallo-chaperone in the urease assembly: a calorimetric and crystallographic study]], Barbara Zambelli, Katarzyna Banaszak, Anna Merloni, Agnieszka Kiliszek, Wojciech Rypniewski, Stefano Luciano Ciurli [https://dx.doi.org/10.1007/s00775-013-1049-6 https://dx.doi.org/10.1007/s00775-013-1049-6]

# [[Journal:JBIC:24|Solution structure and metal ion binding sites of the human CPEB3 ribozyme's P4 domain]], Miriam Skilandat, Magdalena Rowinska-Zyrek and Roland K. O. Sigel [https://www.ncbi.nlm.nih.gov/pubmed/24652468 https://www.ncbi.nlm.nih.gov/pubmed/24652468]

# [[Journal:JBIC:25|Synthesis, characterization and binding properties towards CT-DNA and Lipoxygenase, of mixed ligand silver(I) complexes with 2-mercapto-thiazole and its derivatives and triphenylphosphine.]], L. Kyros, C.N. Banti, N. Kourkoumelis, M. Kubicki, I. Sainis and S.K. Hadjikakou [https://dx.doi.org/10.1007/s00775-014-1089-6 https://dx.doi.org/10.1007/s00775-014-1089-6]

# [[Journal:JBIC:26|Fluoride inhibition of Sporosarcina pasteurii urease: structure and thermodynamics]], Stefano Benini, Michele Cianci, Luca Mazzei and Stefano Ciurli [https://www.ncbi.nlm.nih.gov/pubmed/25113581 https://www.ncbi.nlm.nih.gov/pubmed/25113581]

# [[Journal:JBIC:27|Aromatic aldehydes at the active site of Aldehyde Oxidoreductase from Desulfovibrio gigas: Reactivity and Molecular Details of the Enzyme-Substrate and Enzyme-Product Interactions]], Correia HD, Marangon J, Brondino CD, Moura JJ, Romao MJ, Gonzalez PJ, Santos-Silva T [https://dx.doi.org/10.1007/s00775-014-1196-4 https://dx.doi.org/10.1007/s00775-014-1196-4]

# [[Journal:JBIC:28|Crystallographic studies of [NiFe]-hydrogenase mutants: towards consensus structures for the elusive unready oxidized states]], Anne Volbeda, Lydie Martin, Elodie Barbier, Oscar Gutierrez-Sanz, Antonio L. De Lacey, Pierre-Pol Liebgott, Sebastien Dementin, Marc Rousset, Juan Fontecilla-Camps [https://dx.doi.org/10.1007/s00775-014-1203-9 https://dx.doi.org/10.1007/s00775-014-1203-9]

# [[Journal:JBIC:29|High-resolution crystal structure of Z-DNA in complex with Cr3+ cations]], Pawel Drozdzal, Miroslaw Gilski, Ryszard Kierzek, Lechoslaw Lomozik, Mariusz Jaskolski [https://dx.doi.org/10.1007/s00775-015-1247-5 https://dx.doi.org/10.1007/s00775-015-1247-5]

# [[Journal:JBIC:30|Structural Characterization of Metal Binding to a Cold-adapted Frataxin]], Martín E. Noguera, Ernesto A. Roman, Juan B. Rigal, Alexandra Cousido-Siah, André Mitschler, Alberto Podjarny, and Javier Santos [https://dx.doi.org/10.1007/s00775-015-1251-9 https://dx.doi.org/10.1007/s00775-015-1251-9]

# [[Journal:JBIC:31|Conformational control of the binding of diatomic gases to cytochrome c’]], Andreea Manole, Demet Kekilli, Dimitri A. Svistunenko, Michael T. Wilson, Paul S. Dobbin, Michael A. Hough [https://www.ncbi.nlm.nih.gov/pubmed/25792378 https://www.ncbi.nlm.nih.gov/pubmed/25792378]

# [[Journal:JBIC:32|Analyzing the Catalytic Role of Active Site Residues in the Fe-Type Nitrile Hydratase from ''Comamonas testosteroni'' Ni1]], Salette Martinez, Rui Wu, Karoline Krzywda, Veronika Opalka, Hei Chan, Dali Liu, and Richard C. Holz [https://dx.doi.org/10.1007/s00775-015-1273-3 https://dx.doi.org/10.1007/s00775-015-1273-3]

# [[Journal:JBIC:33|Structural characterization of zinc-bound Zmp1, a zinc-dependent metalloprotease secreted by Clostridium difficile]], Jeffrey T. Rubino, Manuele Martinelli, Francesca Cantini, Andrea Castagnetti, Rosanna Leuzzi, Lucia Banci and Maria Scarselli [https://dx.doi.org/10.1007/s00775-015-1319-6 https://dx.doi.org/10.1007/s00775-015-1319-6]

=== JBSD ''Journal of Biomolecular Structure and Dynamics'' ===

# [[Journal:JBSD:1|An Insight to the Dynamics of Conserved Water Mediated Salt Bridge Interaction and Inter-Domain Recognition in hIMPDH Isoforms]], Hridoy R Bairagya and Bishnu P Mukhopadhyay [https://dx.doi.org/10.1080/07391102.2012.712458 https://dx.doi.org/10.1080/07391102.2012.712458]

# [[Journal:JBSD:2|Elucidation by NMR solution of neurotensin in Small Unilamellar Vesicle environment: molecular surveys for neurotensin receptor recognition]], Grégory Da Costa, Arnaud Bondon, Olivier Delalande, Liza Mouret, Jean-Pierre Monti [https://dx.doi.org/10.1080/07391102.2012.712459 https://dx.doi.org/10.1080/07391102.2012.712459]

# [[Journal:JBSD:3|Gating and conduction of nano-channel forming proteins, a computational approach]], A.B. Besya, H. Mobasheri, M.R. Ejtehadi [https://dx.doi.org/10.1080/07391102.2012.712460 https://dx.doi.org/10.1080/07391102.2012.712460]

# [[Journal:JBSD:4|Dominant-negative Effects in Prion Diseases: Insights from Molecular Dynamics Simulations on Mouse Prion Protein Chimeras]], Xiaojing Cong, Salvatore Bongarzone, Gabriele Giachin, Giulia Rossetti, Paolo Carloni, Giuseppe Legname [https://dx.doi.org/10.1080/07391102.2012.712477 https://dx.doi.org/10.1080/07391102.2012.712477]

# [[Journal:JBSD:5|Influence of divalent magnesium ion on DNA: molecular dynamics simulation studies]], Sanchita Mukherjee and Dhananjay Bhattacharyya [https://dx.doi.org/10.1080/07391102.2012.713780 https://dx.doi.org/10.1080/07391102.2012.713780]

# [[Journal:JBSD:6|Evidence-based docking of the urease activation complex]], Rodrigo Ligabue-Braun, Rafael Real-Guerra, Célia Regina Carlini, Hugo Verli [https://dx.doi.org/10.1080/07391102.2012.713782 https://dx.doi.org/10.1080/07391102.2012.713782]

# [[Journal:JBSD:7|Protein flexibility and conformational states of Leishmania antigen eIF-4A: Identification of a novel plausible protein adjuvant using comparative genomics and molecular modeling]], Ning-Ning Wei, Adel Hamza, Ce Hao, Trudy Johnson-Scalise, Zhilong Xiu, Frederick Naftolin, Chang-Guo Zhan [https://dx.doi.org/10.1080/07391102.2012.713781 https://dx.doi.org/10.1080/07391102.2012.713781]

# [[Journal:JBSD:8|Docking and molecular dynamics studies of peptide inhibitors of ornithine decarboxylase: a rate-limiting enzyme for the metabolism of ''Fusarium solani'']], Sanchita, Rashi Chauhan, Garima Soni, Babu Sudhamalla, Ashok Sharma [https://dx.doi.org/10.1080/07391102.2012.718526 https://dx.doi.org/10.1080/07391102.2012.718526]

# [[Journal:JBSD:9|Carbon monoxide binding to the heme group at the dimeric interface modulates structure and copper accessibility in the Cu,Zn superoxide dismutase from ''Haemophilus ducreyi'': in silico and in vitro evidences]], Giovanni Chillemi, Serena De Santis, Mattia Falconi, Giordano Mancini, Valentina Migliorati, Andrea Battistoni, Francesca Pacello, Alessandro Desideri, Paola D’Angelo [https://dx.doi.org/10.1080/07391102.2012.680028 https://dx.doi.org/10.1080/07391102.2012.680028]

# [[Journal:JBSD:10|Para-(benzoyl)-phenylalanine as a potential inhibitor against LpxC of ''Leptospira spp.'': Homology modeling, docking and molecular dynamics study]], Dibyabhaba Pradhan, Vani Priyadarshini, Manne Munikumar, Sandeep Swargam, Amineni Umamaheswari & Aparna Bitla [https://dx.doi.org/10.1080/07391102.2012.758056 https://dx.doi.org/10.1080/07391102.2012.758056]

# [[Journal:JBSD:11|Drug resistance mechanism of PncA in ''Mycobacterium Tuberculosis'']], Vidya Rajendran and Rao Sethumadhavan [https://dx.doi.org/10.1080/07391102.2012.759885 https://dx.doi.org/10.1080/07391102.2012.759885]

# [[Journal:JBSD:12|Analysis of Delta–Notch interaction by molecular modeling and molecular dynamic simulation studies]], Riddhi Majumder, Sujata Roy, Ashoke Ranjan Thakur [https://dx.doi.org/10.1080/07391102.2012.674184 https://dx.doi.org/10.1080/07391102.2012.674184]

# [[Journal:JBSD:13|Mechanism of BAG1 repair on Parkinson’s disease-linked DJ1 mutation]], Calvin Yu-Chian Chen [https://dx.doi.org/10.1080/07391102.2012.674182 https://dx.doi.org/10.1080/07391102.2012.674182]

# [[Journal:JBSD:14|Traditional Chinese medicine as dual guardians against hypertension and cancer?]], Weng Ieong Tou, Calvin Yu-Chian Chen [https://dx.doi.org/10.1080/07391102.2012.680030 https://dx.doi.org/10.1080/07391102.2012.680030]

# [[Journal:JBSD:15|The molecular origin of the MMR-dependent apoptosis pathway from dynamics analysis of MutSα-DNA complexes]], Lacramioara Negureanu, Freddie R. Salsbury [https://dx.doi.org/10.1080/07391102.2012.680034 https://dx.doi.org/10.1080/07391102.2012.680034]

# [[Journal:JBSD:16|The extracellular subunit interface of the 5-HT3 receptors: a computational alanine scanning mutagenesis study]], Francesca De Rienzo, Arménio J. Moura Barbosa, Marta A.S. Perez, Pedro A. Fernandes, Maria J. Ramos, Maria Cristina Menziani [https://dx.doi.org/10.1080/07391102.2012.680029 https://dx.doi.org/10.1080/07391102.2012.680029]

# [[Journal:JBSD:17|DNA Conformation and Energy in Nucleosome Core: A Theoretical Approach]], Davood Norouzi and Farshid Mohammad-Rafiee [https://dx.doi.org/10.1080/07391102.2012.755134 https://dx.doi.org/10.1080/07391102.2012.755134]

# [[Journal:JBSD:18|Molecular modeling study for conformational changes of Sirtuin 2 due to substrate and inhibitor binding]], Sugunadevi Sakkiah, Meganathan Chandrasekaran, Yuno Lee, Songmi Kim, Keun Woo Lee [https://dx.doi.org/10.1080/07391102.2012.680026 https://dx.doi.org/10.1080/07391102.2012.680026]

# [[Journal:JBSD:19|Crystal structure of the CN-hydrolase SA0302 from the pathogenic bacterium ''Staphylococcus aureus'' belonging to the Nit and NitFhit Branch of the nitrilase superfamily]], Roni D. Gordon, Wei Qiu, Vladimir Romanov, Kim Lam, Maria Soloveychik, Diana Benetteraj, Kevin P. Battaile, Yuri N. Chirgadze, Emil F. Pai, and Nickolay Y. Chirgadze [https://dx.doi.org/10.1080/07391102.2012.719111 https://dx.doi.org/10.1080/07391102.2012.719111]

# [[Journal:JBSD:20|Insight into TPMT*23 Mutation Mis-folding Using Molecular Dynamics Simulation and Protein Structure Analysis]], Sofiene Larif, Chaker Ben Salem, Zohra Soua, Houssem Hmouda, Kamel Bouraoui [https://dx.doi.org/10.1080/07391102.2012.721495 https://dx.doi.org/10.1080/07391102.2012.721495]

# [[Journal:JBSD:21|Identification of structural motifs in the E2 glycoprotein of Chikungunya involved in virus - host interaction]], J. Asnet Mary, R. Paramasivan, B.K. Tyagi, Surender Mohan and R. Shenbagarathai [https://dx.doi.org/10.1080/07391102.2012.721496 https://dx.doi.org/10.1080/07391102.2012.721496]

# [[Journal:JBSD:22|Molecular dynamics simulations of the thermal stability of tteRBP and ecRBP]], Xian-li Feng, Xi Zhao, Hui Yu, Tie-dong Sun, Xu-ri Huang [https://dx.doi.org/10.1080/07391102.2012.721497 https://dx.doi.org/10.1080/07391102.2012.721497]

# [[Journal:JBSD:23|Molecular Dynamics Simulation to Investigate the Impact of Disulfide Bond Formation on Conformational Stability of Chicken Cystatin I66Q Mutant]], Jianwei He, Linan Xu, Zhiyuan Zou, Nobuhiro Ueyama, Hui Li, Akio Kato, Gary W. Jones, Youtao Song [https://dx.doi.org/10.1080/07391102.2012.721498 https://dx.doi.org/10.1080/07391102.2012.721498]

# [[Journal:JBSD:24|Insights into the drug resistance induced by the BaDHPS mutations: molecular dynamic simulations and MM/GBSA studies]], Wen-Ting Chu, Ji-Long Zhang, Qing-Chuan Zheng, Lin Chen, Qiao Xue, and Hong-Xing Zhang [https://dx.doi.org/10.1080/07391102.2012.726529 https://dx.doi.org/10.1080/07391102.2012.726529]

# [[Journal:JBSD:25|Remarkable Disparity in Mechanical Response among the Extracellular Domains of Type I and II Cadherins]], Liu Ruchuan, Fei Wu and Jean Paul Thiery [https://dx.doi.org/10.1080/07391102.2012.726530 https://dx.doi.org/10.1080/07391102.2012.726530]

# [[Journal:JBSD:26|Investigation on the Site-Selective Binding of Bovine Serum Albumin by Erlotinib Hydrochloride]], Yan Liu, Mingmao Chen, Zhipu Luo, Jingjing Lin, Ling Song [https://dx.doi.org/10.1080/07391102.2012.726532 https://dx.doi.org/10.1080/07391102.2012.726532]

# [[Journal:JBSD:27|Interhelical loops within the bHLH domain are determinant in maintaining TWIST1-DNA complexes]], Charlotte Bouard, Raphael Terreux, Jennifer Hope, Julie Anne Chemelle, Alain Puisieux, Stéphane Ansieau, Lea Payen [https://dx.doi.org/10.1080/07391102.2012.762722 https://dx.doi.org/10.1080/07391102.2012.762722]

# [[Journal:JBSD:28|Investigation of Silent Information Regulator 1 (Sirt1) Agonists from Traditional Chinese Medicine]], Kuan-Chung Chen, Yi-Ru Jian, Mao-Feng Sun, Tung-Ti Chang, Cheng-Chun Lee & Calvin Yu-Chian Chen [https://dx.doi.org/10.1080/07391102.2012.726191 https://dx.doi.org/10.1080/07391102.2012.726191]

# [[Journal:JBSD:29|Han ethnicity-specific type 2 diabetic treatment from traditional Chinese medicine?]], Kuan-Chung Chen, Su-Sen Chang, Fuu-Jen Tsai, Calvin Yu-Chian Chen [https://dx.doi.org/10.1080/07391102.2012.732340 https://dx.doi.org/10.1080/07391102.2012.732340]

# [[Journal:JBSD:30|Conformational dynamics of full-length inducible human Hsp70 derived from microsecond molecular dynamics simulations in explicit solvent]], Adrien Nicolaï, Patrice Delarue and Patrick Senet [https://dx.doi.org/10.1080/07391102.2012.726190 https://dx.doi.org/10.1080/07391102.2012.726190]

# [[Journal:JBSD:31|Non-specificity and synergy at the binding site of the carboplatin-induced DNA adduct via molecular dynamics simulations of the MutSα-DNA recognition complex]], Lacramioara Negureanu & Freddie Salsbury, Jr [https://dx.doi.org/10.1080/07391102.2013.799437 https://dx.doi.org/10.1080/07391102.2013.799437]

# [[Journal:JBSD:32|Cooperative Stabilization of Zn²⁺: DNA Complexes Through Netropsin Binding in the Minor Groove of FdU-Substituted DNA]], Supratim Ghosh, Freddie R. Salsbury Jr., David A. Horita and William H. Gmeiner [https://dx.doi.org/10.1080/07391102.2012.732343 https://dx.doi.org/10.1080/07391102.2012.732343]

# [[Journal:JBSD:33|Probing the Structure of ''Mycobacterium tuberculosis'' MbtA: Model Validation Using Molecular Dynamics Simulations and Docking Studies]], Lakshmi Maganti, Open Source Drug Discovery Consortium & Nanda Ghoshal [https://dx.doi.org/10.1080/07391102.2012.762752 https://dx.doi.org/10.1080/07391102.2012.762752]

# [[Journal:JBSD:34|Systematic investigation of predicted effect of nonsynonymous SNPs in human prion protein gene: A molecular modeling and molecular dynamics study]], Samad Jahandideha & Degui Zhia [https://dx.doi.org/10.1080/07391102.2012.763216 https://dx.doi.org/10.1080/07391102.2012.763216]

# [[Journal:JBSD:35|A Possible Strategy against Head and Neck Cancer: ''In Silico''. Investigation of Three-in-One inhibitors]], Yung-An Tsou, Kuan-Chung Chen, Su-Sen Chang, Yeong-Ray Wen, Calvin Yu-Chian Chen [https://dx.doi.org/10.1080/07391102.2012.736773 https://dx.doi.org/10.1080/07391102.2012.736773]

# [[Journal:JBSD:36|Structural Insights into the South African HIV-1 Subtype C Protease: Impact of hinge region dynamics and flap flexibility in drug resistance]], Previn Naicker, Ikechukwu Achilonu, Sylvia Fanucchi, Manuel Fernandes, Mahmoud A.A. Ibrahim, Heini W. Dirr, Mahmoud E.S. Soliman, and Yasien Sayed [https://dx.doi.org/10.1080/07391102.2012.736774 https://dx.doi.org/10.1080/07391102.2012.736774]

# [[Journal:JBSD:37|Interaction of Piscidin-1 with Zwitterionic Versus Anionic Membranes: a Comparative Molecular Dynamics Study]], Arezoo Rahmanpour; Mohammad Mehdi Ghahremanpour; Faramarz Mehrnejad, Majid Erfani Moghaddam [https://dx.doi.org/10.1080/07391102.2012.737295 https://dx.doi.org/10.1080/07391102.2012.737295]

# [[Journal:JBSD:38|Memory-Enhancement by Traditional Chinese Medicine?]], I-Chi Hung, Su-sen Chang, Pei-Chun, Chang, Cheng-Chun Lee, Calvin Yu-Chian Chen [https://dx.doi.org/10.1080/07391102.2012.741052 https://dx.doi.org/10.1080/07391102.2012.741052]

# [[Journal:JBSD:39|The remarkable efficiency of a Pin-II proteinase inhibitor sans two conserved disulfide bonds is due to enhanced flexibility and hydrogen-bond density in the reactive loop]], Rakesh S. Joshi, Manasi Mishra, Vaijayanti A. Tamhane, Anirban Ghosh, Uddhavesh Sonavane, C. G. Suresh, Rajendra Joshi, Vidya S. Gupta and Ashok P. Giri [https://dx.doi.org/10.1080/07391102.2012.745378 https://dx.doi.org/10.1080/07391102.2012.745378]

# [[Journal:JBSD:40|Traditional Chinese medicine application in HIV: An ''in silico'' study]], Hung-Jin Huanga, Yi-Ru Jianb, Calvin Yu-Chian Chen [https://dx.doi.org/10.1080/07391102.2012.745168 https://dx.doi.org/10.1080/07391102.2012.745168]

# [[Journal:JBSD:41|Molecular Mechanism of HIV-1 gp120 Mutations That Reduce CD4 Binding Affinity]], Kristin Kassler and Heinrich Sticht [https://dx.doi.org/10.1080/07391102.2012.746946 https://dx.doi.org/10.1080/07391102.2012.746946]

=== JMB ''Journal of Molecular Biology'' ===

# [[Journal:JMB:1|Cyt1Aa Toxin: High Resolution Structure Reveals Implications for its Membrane-Perforating Function]], Cohen S, Albeck S, Ben-Dov E, Cahan R, Firer M, Zaritsky A, Dym O. [https://www.ncbi.nlm.nih.gov/pubmed/21959261 https://www.ncbi.nlm.nih.gov/pubmed/21959261]

# [[Journal:JMB:2|Catalytic versatility and backups in enzyme active sites: The case of serum paraoxanase 1]], Moshe Ben-David, Mikael Elias, Jean-Jacques Filippi, Elisabet Dunach, Israel Silman, Joel Sussman and Dan Tawfik, PhD [https://dx.doi.org/10.1016/j.jmb.2012.02.042 https://dx.doi.org/10.1016/j.jmb.2012.02.042]

# [[Journal:JMB:3|Catalytic metal ion rearrangements underline promiscuity and evolvability of a metalloenzyme]], Moshe Ben-­David, Grzegorz Wieczorek, Mikael Elias, Israel Silman, Joel L. Sussman and Dan S. Tawfik [https://www.ncbi.nlm.nih.gov/pubmed/23318950 https://www.ncbi.nlm.nih.gov/pubmed/23318950]

=== JMedChem ''Journal of Medicinal Chemistry'' ===

# [[Journal:JMedChem:1|Structure of estradiol metal chelate and estrogen receptor complex: The basis for designing a new class of SERMs]], Min-Jun Li, Harry M. Greenblatt, Orly Dym, Shira Albeck, Adi Pais, Chidambaram Gunanathan, David Milstein, Hadassa Degani, and Joel L. Sussman [https://www.ncbi.nlm.nih.gov/pubmed/21473635 https://www.ncbi.nlm.nih.gov/pubmed/21473635]

=== JSB ''Journal of Structural Biology'' ===

# [[Journal:JSB:1|Structural and functional insights into a dodecameric molecular machine – The RuvBL1/RuvBL2 complex]], Sabine Gorynia, Tiago M. Bandeiras, Filipa G. Pinho, Colin E. McVey, Clemens Vonrhein, Adam Round, Dmitri I. Svergun, Peter Donner, Pedro M. Matias and Maria Arménia Carrondo [https://www.ncbi.nlm.nih.gov/pubmed/21933716 https://www.ncbi.nlm.nih.gov/pubmed/21933716]

# [[Journal:MicroPubl Biol:000570|Biochemical and structural characterization of the flavodoxin-like domain of the ''Schizosaccharomyces japonicus'' putative tRNAPhe 4-demethylwyosine synthase TYW1 in complex with FMN]], Ljiljana Sjekloća, Adrian R. Ferré-D’Amaré [https://dx.doi.org/10.17912/micropub.biology.000570 https://dx.doi.org/10.17912/micropub.biology.000570]

# [[Journal:MicroPubl Biol:000574|''Gossypium hirsutum'' gene of unknown function, Gohir.A02G044702.1, encodes a potential B3 Transcription Factor of the REM subfamily]], Michael Allen, Amanda M. Hulse-Kemp, Amanda R. Storm [https://dx.doi.org/10.17912/micropub.biology.000574 https://dx.doi.org/10.17912/micropub.biology.000574]

# [[Journal:MicroPubl Biol:000606|The SSU Processome Component Utp25p is a Pseudohelicase]], Rafe Helwer and J. Michael Charette [https://dx.doi.org/10.17912/micropub.biology.000606 https://dx.doi.org/10.17912/micropub.biology.000606]

# [[Journal:MicroPubl Biol:000669|''Gossypium hirsutum'' gene Gohir.A03G007700.1 encodes a potential VAN3-binding protein with a phosphoinositide-binding site]], Emma R. Smith, Lauryn R. Caulley, Amanda M. Hulse-Kemp, Amanda R Storm, Angela K. Stoeckman [https://dx.doi.org/10.17912/micropub.biology.000669 https://dx.doi.org/10.17912/micropub.biology.000669]

# [[Journal:MicroPubl Biol:000670|''Gossypium hirsutum'' gene of unknown function, Gohir.A02G039501.1, encodes a potential DNA-binding ALOG protein involved in gene regulation]], Jonathan Zirkel, Amanda M. Hulse-Kemp, Amanda R. Storm [https://dx.doi.org/10.17912/micropub.biology.000670 https://dx.doi.org/10.17912/micropub.biology.000670]

# [[Journal:MicroPubl Biol:000763|Quaternary structure analysis of IRE1]], Samirul Bashir, Debnath Pal, Ozaira Qadri, Mariam Banday, and Khalid Majid Fazili [https://dx.doi.org/10.17912/micropub.biology.000763 https://dx.doi.org/10.17912/micropub.biology.000763]

# [[Journal:MicroPubl Biol:000867|''Gossypium hirsutum'' gene of unknown function Gohir.A03G0737001 encodes a potential Chaperone-like Protein of protochlorophyllide oxidoreductase (CPP1)]], Alana N. Osborne, Andrew Osagiede, Amanda R. Storm, Amanda M. Hulse-Kemp, Angela K. Stoeckman [https://dx.doi.org/10.17912/micropub.biology.000867 https://dx.doi.org/10.17912/micropub.biology.000867]

=== Molecular Cell '' '' ===

# [[Journal:Molecular Cell:1|Automated computational design of human enzymes for high bacterial expression and stability]], Adi Goldenzweig, Moshe Goldsmith, Shannon E Hill, Or Gertman, Paola Laurino, Yacov Ashani, Orly Dym, Tamar Unger, Shira Albeck, Jaime Prilusky, Raquel L Lieberman, Amir Aharoni, Israel Silman, Joel L Sussman, Dan S Tawfik and Sarel J Fleishman [https://www.ncbi.nlm.nih.gov/pubmed/27425410 https://www.ncbi.nlm.nih.gov/pubmed/27425410]

# [[Journal:Molecular Cell:2|Automated design of efficient and functionally diverse enzyme repertoires]], Olga Khersonsky, Rosalie Lipsh, Ziv Avizemer, Yacov Ashani, Moshe Goldsmith, Haim Leader, Orly Dym, Shelly Rogotner, Devin L. Trudeau, Jaime Prilusky, Pep Amengual-Rigo, Victor Guallar, Dan S. Tawfik, and Sarel J. Fleishman [https://dx.doi.org/10.1016/j.molcel.2018.08.033 https://dx.doi.org/10.1016/j.molcel.2018.08.033]

=== Neuropharmacology '' '' ===

# [[Journal:Neuropharmacology:1|Slow-binding inhibitors of acetylcholinesterase of medical interest]], Sofya V. Lushchekina and Patrick Masson [https://dx.doi.org/10.1016/j.neuropharm.2020.108236 https://dx.doi.org/10.1016/j.neuropharm.2020.108236]

# [[Journal:Neuropharmacology:2|Computational Studies on Cholinesterases: Strengthening our Understanding of the Integration of Structure, Dynamics and Function]], Joel L. Sussman and Israel Silman [https://www.ncbi.nlm.nih.gov/pubmed/32795461 https://www.ncbi.nlm.nih.gov/pubmed/32795461]

=== PLoS ONE '' '' ===

# [[Journal:PLoS ONE:1|Antiviral Activity of 3(2H)- and 6-Chloro-3(2H)-Isoflavenes against Highly Diverged, Neurovirulent Vaccine-Derived, Type2 Poliovirus Sewage Isolates]], Lester M. Shulman, Danit Sofer, Yossi Manor, Ella Mendelson, Jean Balanant, Anna Laura Salvati, Francis Delpeyroux, Lucia Fiore [https://dx.doi.org/10.1371/journal.pone.0018360 https://dx.doi.org/10.1371/journal.pone.0018360]

# [[Journal:PLoS ONE:2|Structural Basis of Enzymatic Activity for the Ferulic Acid Decarboxylase (FADase) from Enterobacter sp. Px6-4]], Wen Gu, Jinkui Yang, Zhiyong Lou, Lianming Liang, Yuna Sun, Jingwen Huang, Xuemei Li, Yi Cao, Zhaohui Meng, Ke-Qin Zhang [https://www.ncbi.nlm.nih.gov/pubmed/21283705 https://www.ncbi.nlm.nih.gov/pubmed/21283705]

=== PMC ''Perspectives in Medicinal Chemistry'' ===

# [[Journal:PMC:1|Stereochemical Basis for a Unified Structure Activity Theory of Aromatic and Heterocyclic Rings in Selected Opioids and Opioid Peptides]], Joel S. Goldberg [https://dx.doi.org/10.4137/PMC.S3898 https://dx.doi.org/10.4137/PMC.S3898]

=== Protein Science '' '' ===

# [[Journal:Protein Science:1|Structural and functional characterization of the interaction of the photosensitizing probe methylene blue with ''Torpedo californica'' acetylcholinesterase]], Aviv Paz, Esther Roth, Yacov Ashani, Yechun Xu, Valery L. Shnyrov, Joel L. Sussman, Israel Silman, and Lev Weiner [https://dx.doi.org/10.1002/pro.2101 https://dx.doi.org/10.1002/pro.2101]

# [[Journal:Protein Science:2|The Impact of Crystallization Conditions on Structure-Based Drug Design: a Case Study on the Methylene Blue/Acetylcholinesterase Complex]], Orly Dym, Wanling Song, Clifford Felder, Esther Roth, Valery Shnyrov, Yacov, Ashani, Yechun Xu, Robbie P. Joosten, Lev Weiner, Joel L. Sussman, and Israel Silman [https://www.ncbi.nlm.nih.gov/pubmed/26990888 https://www.ncbi.nlm.nih.gov/pubmed/26990888]

# [[Journal:Protein Science:3|''Torpedo californica'' acetylcholinesterase is stabilized by binding of a divalent metal ion to a novel and versatile 4D motif]], Israel Silman, Valery L. Shnyrov, Yacov Ashani, Esther Roth, Anne Nicolas, Joel L Sussman, and Lev Weiner [https://www.ncbi.nlm.nih.gov/pubmed/33686648 https://www.ncbi.nlm.nih.gov/pubmed/33686648]

=== Proteins '' '' ===

https://proteopedia.org/logos/small/Proteins.gif

# [[Journal:Proteins:2|Protein Stability and ''in Vivo'' Concentration of Missense Mutations in Phenylalanine Hydroxylase]], Zhen Shi, Jenn Sellers, and John Moult [https://www.ncbi.nlm.nih.gov/pubmed/21953985 https://www.ncbi.nlm.nih.gov/pubmed/21953985]

# [[Journal:Proteins:3|Do ‘''Newly Born''’ Orphan Proteins Resemble ‘''Never Born''’ Proteins? A Study Using Three Deep Learning Algorithms]], Jing Liu, Rongqing Yuan, Wei Shao, Jitong Wang, Israel Silman and Joel Sussman [https://www.ncbi.nlm.nih.gov/pubmed/37092778 https://www.ncbi.nlm.nih.gov/pubmed/37092778]

=== Science '' '' ===

# [[Journal:Science:1|Structural basis of transcription activation]], Yu Feng, Yu Zhang, Richard H. Ebright [https://www.ncbi.nlm.nih.gov/pubmed/27284196 https://www.ncbi.nlm.nih.gov/pubmed/27284196]

=== Structure '' '' ===

# [[Journal:Structure:1|Promiscuous Protein Binding as a Function of Protein Stability]], Ruth Cohen-Khait, Orly Dym, Shelly Hamer-Rogotner and Gideon Schreiber [https://dx.doi.org/10.1016/j.str.2017.11.002 https://dx.doi.org/10.1016/j.str.2017.11.002]