4ldn: Difference between revisions

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-{{STRUCTURE_4ldn|  PDB=4ldn  |  SCENE=  }}
-===Crystal structure of a putative purine nucleoside phosphorylase from Vibrio fischeri ES114 (Target NYSGRC-029521)===
-==About this Structure==
+==Crystal structure of a putative purine nucleoside phosphorylase from Vibrio fischeri ES114 (Target NYSGRC-029521)==
-[[4ldn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_fischeri_es114 Vibrio fischeri es114]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LDN OCA].
+<StructureSection load='4ldn' size='340' side='right'caption='[[4ldn]], [[Resolution|resolution]] 1.48&Aring;' scene=''>
-[[Category: Purine-nucleoside phosphorylase]]
+== Structural highlights ==
-[[Category: Vibrio fischeri es114]]
+<table><tr><td colspan='2'>[[4ldn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aliivibrio_fischeri_ES114 Aliivibrio fischeri ES114]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LDN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LDN FirstGlance]. <br>
-[[Category: Almo, S C.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.48&#8491;</td></tr>
-[[Category: NYSGRC, New York Structural Genomics Research Consortium.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-[[Category: Sampathkumar, P.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ldn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ldn OCA], [https://pdbe.org/4ldn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ldn RCSB], [https://www.ebi.ac.uk/pdbsum/4ldn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ldn ProSAT]</span></td></tr>
-[[Category: New york structural genomics research consortium]]
+</table>
-[[Category: Nysgrc]]
+== Function ==
-[[Category: Psi-biology]]
+[https://www.uniprot.org/uniprot/DEOD3_ALIF1 DEOD3_ALIF1] Catalyzes the reversible phosphorolytic breakdown of the N-glycosidic bond in the beta-(deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.[HAMAP-Rule:MF_01627]
-[[Category: Structural genomic]]
-[[Category: Transferase]]
+==See Also==
+*[[Purine nucleoside phosphorylase 3D structures|Purine nucleoside phosphorylase 3D structures]]
+__TOC__
+</StructureSection>
+[[Category: Aliivibrio fischeri ES114]]
+[[Category: Large Structures]]
+[[Category: Almo SC]]
+[[Category: Sampathkumar P]]