3lx6: Difference between revisions

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[[Image:3lx6.png|left|200px]]


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==Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T==
The line below this paragraph, containing "STRUCTURE_3lx6", creates the "Structure Box" on the page.
<StructureSection load='3lx6' size='340' side='right'caption='[[3lx6]], [[Resolution|resolution]] 2.29&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3lx6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri_2a_str._2457T Shigella flexneri 2a str. 2457T]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LX6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LX6 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.29&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3lx6|  PDB=3lx6  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lx6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lx6 OCA], [https://pdbe.org/3lx6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lx6 RCSB], [https://www.ebi.ac.uk/pdbsum/3lx6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lx6 ProSAT]</span></td></tr>
 
</table>
===Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
[[3lx6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Shigella_flexneri_2a Shigella flexneri 2a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LX6 OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lx/3lx6_consurf.spt"</scriptWhenChecked>
[[Category: Shigella flexneri 2a]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Almo, S C.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Burley, S K.]]
  </jmolCheckbox>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lx6 ConSurf].
[[Category: Ramagopal, U A.]]
<div style="clear:both"></div>
[[Category: Toro, R.]]
__TOC__
[[Category: Dcm]]
</StructureSection>
[[Category: New york sgx research center for structural genomic]]
[[Category: Large Structures]]
[[Category: Nysgxrc]]
[[Category: Shigella flexneri 2a str. 2457T]]
[[Category: Protein structure initiative]]
[[Category: Almo SC]]
[[Category: Psi-2]]
[[Category: Burley SK]]
[[Category: Restriction system]]
[[Category: Ramagopal UA]]
[[Category: Structural genomic]]
[[Category: Toro R]]
[[Category: Transferase]]

Latest revision as of 11:02, 9 October 2024

Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457TCrystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T

Structural highlights

3lx6 is a 2 chain structure with sequence from Shigella flexneri 2a str. 2457T. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.29Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3lx6, resolution 2.29Å

Drag the structure with the mouse to rotate

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OCA