3lv9: Difference between revisions

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==Crystal structure of CBS domain of a putative transporter from Clostridium difficile 630==
==Crystal structure of CBS domain of a putative transporter from Clostridium difficile 630==
<StructureSection load='3lv9' size='340' side='right' caption='[[3lv9]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='3lv9' size='340' side='right'caption='[[3lv9]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3lv9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridioides_difficile_630 Clostridioides difficile 630]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LV9 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3lv9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridioides_difficile_630 Clostridioides difficile 630]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LV9 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lv9 OCA], [http://pdbe.org/3lv9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lv9 RCSB], [http://www.ebi.ac.uk/pdbsum/3lv9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lv9 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lv9 OCA], [https://pdbe.org/3lv9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lv9 RCSB], [https://www.ebi.ac.uk/pdbsum/3lv9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lv9 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q183U2_CLOD6 Q183U2_CLOD6]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lv/3lv9_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lv/3lv9_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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</StructureSection>
</StructureSection>
[[Category: Clostridioides difficile 630]]
[[Category: Clostridioides difficile 630]]
[[Category: Cobb, G]]
[[Category: Large Structures]]
[[Category: Joachimiak, A]]
[[Category: Cobb G]]
[[Category: Structural genomic]]
[[Category: Joachimiak A]]
[[Category: Nocek, B]]
[[Category: Nocek B]]
[[Category: Tesar, C]]
[[Category: Tesar C]]
[[Category: Cbs domain]]
[[Category: Cell membrane]]
[[Category: Mcsg]]
[[Category: Membrane]]
[[Category: Membrane protein]]
[[Category: PSI, Protein structure initiative]]
[[Category: Transmembrane]]

Latest revision as of 11:02, 9 October 2024

Crystal structure of CBS domain of a putative transporter from Clostridium difficile 630Crystal structure of CBS domain of a putative transporter from Clostridium difficile 630

Structural highlights

3lv9 is a 1 chain structure with sequence from Clostridioides difficile 630. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.4Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q183U2_CLOD6

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3lv9, resolution 2.40Å

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OCA