3f1x: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:


==Three dimensional structure of the serine acetyltransferase from Bacteroides vulgatus, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET BVR62.==
==Three dimensional structure of the serine acetyltransferase from Bacteroides vulgatus, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET BVR62.==
<StructureSection load='3f1x' size='340' side='right' caption='[[3f1x]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='3f1x' size='340' side='right'caption='[[3f1x]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3f1x]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacv8 Bacv8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F1X OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3F1X FirstGlance]. <br>
<table><tr><td colspan='2'>[[3f1x]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Phocaeicola_vulgatus_ATCC_8482 Phocaeicola vulgatus ATCC 8482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F1X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F1X FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1sst|1sst]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BVU_1092 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=435590 BACV8])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f1x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f1x OCA], [https://pdbe.org/3f1x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f1x RCSB], [https://www.ebi.ac.uk/pdbsum/3f1x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f1x ProSAT], [https://www.topsan.org/Proteins/NESGC/3f1x TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3f1x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f1x OCA], [http://pdbe.org/3f1x PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3f1x RCSB], [http://www.ebi.ac.uk/pdbsum/3f1x PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3f1x ProSAT], [http://www.topsan.org/Proteins/NESGC/3f1x TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A6KZB9_PHOV8 A6KZB9_PHOV8]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f1/3f1x_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f1/3f1x_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3f1x ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3f1x ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
==See Also==
*[[Proliferating cell nuclear antigen 3D structures|Proliferating cell nuclear antigen 3D structures]]
*[[Serine acetyltransferase|Serine acetyltransferase]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacv8]]
[[Category: Large Structures]]
[[Category: Acton, T B]]
[[Category: Phocaeicola vulgatus ATCC 8482]]
[[Category: Chen, Y]]
[[Category: Acton TB]]
[[Category: Cunningham, K]]
[[Category: Chen Y]]
[[Category: Everett, J K]]
[[Category: Cunningham K]]
[[Category: Hunt, J F]]
[[Category: Everett JK]]
[[Category: Kuzin, A P]]
[[Category: Hunt JF]]
[[Category: Liu, J]]
[[Category: Kuzin AP]]
[[Category: Maglaqui, M]]
[[Category: Liu J]]
[[Category: Mao, L]]
[[Category: Maglaqui M]]
[[Category: Montelione, G T]]
[[Category: Mao L]]
[[Category: Structural genomic]]
[[Category: Montelione GT]]
[[Category: Rost, B]]
[[Category: Rost B]]
[[Category: Sahdev, S]]
[[Category: Sahdev S]]
[[Category: Seetharaman, J]]
[[Category: Seetharaman J]]
[[Category: Tong, L]]
[[Category: Tong L]]
[[Category: Wang, D]]
[[Category: Wang D]]
[[Category: Xiao, R]]
[[Category: Xiao R]]
[[Category: Nesg x-ray bvr62 a6kzb9 a6kzb9_bacv8]]
[[Category: PSI, Protein structure initiative]]
[[Category: Transferase]]

Latest revision as of 10:57, 9 October 2024

Three dimensional structure of the serine acetyltransferase from Bacteroides vulgatus, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET BVR62.Three dimensional structure of the serine acetyltransferase from Bacteroides vulgatus, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET BVR62.

Structural highlights

3f1x is a 1 chain structure with sequence from Phocaeicola vulgatus ATCC 8482. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A6KZB9_PHOV8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3f1x, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA