3esd: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
 ==cut-2b; NCN-Pt-Pincer-Cutinase Hybrid==
-<StructureSection load='3esd' size='340' side='right' caption='[[3esd]], [[Resolution|resolution]] 1.22&Aring;' scene=''>
+<StructureSection load='3esd' size='340' side='right'caption='[[3esd]], [[Resolution|resolution]] 1.22&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3esd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Fusso Fusso]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ESD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ESD FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3esd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Fusarium_vanettenii Fusarium vanettenii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ESD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ESD FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SXC:BROMO(4-{3-[(R)-ETHOXY(4-NITROPHENOXY)PHOSPHORYL]PROPYL}-2,6-BIS[(METHYLSULFANYL-KAPPAS)METHYL]PHENYL-KAPPAC~1~)PALLADIUM(2+)'>SXC</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.22&#8491;</td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cutinase Cutinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.74 3.1.1.74] </span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SXC:BROMO(4-{3-[(R)-ETHOXY(4-NITROPHENOXY)PHOSPHORYL]PROPYL}-2,6-BIS[(METHYLSULFANYL-KAPPAS)METHYL]PHENYL-KAPPAC~1~)PALLADIUM(2+)'>SXC</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3esd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3esd OCA], [http://pdbe.org/3esd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3esd RCSB], [http://www.ebi.ac.uk/pdbsum/3esd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3esd ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3esd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3esd OCA], [https://pdbe.org/3esd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3esd RCSB], [https://www.ebi.ac.uk/pdbsum/3esd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3esd ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/CUTI1_FUSSO CUTI1_FUSSO]] Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle. Allows pathogenic fungi to penetrate through the cuticular barrier into the host plant during the initial stage of the fungal infection.
+[https://www.uniprot.org/uniprot/CUTI1_FUSVN CUTI1_FUSVN] Catalyzes the hydrolysis of complex carboxylic polyesters found in the cell wall of plants (PubMed:18658138, PubMed:19810726, PubMed:8286366, PubMed:8555209). Degrades cutin, a macromolecule that forms the structure of the plant cuticle (PubMed:18658138, PubMed:19810726, PubMed:8286366, PubMed:8555209). Allows pathogenic fungi to penetrate through the cuticular barrier into the host plant during the initial stage of fungal infection (Ref.4).<ref>PMID:18658138</ref> <ref>PMID:19810726</ref> <ref>PMID:8286366</ref> <ref>PMID:8555209</ref> [PROSITE-ProRule:PRU10109]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 15: / Line 15: @@
    <jmolCheckbox>
      <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/es/3esd_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
@@ Line 31: / Line 31: @@
 ==See Also==
-*[[Cutinase|Cutinase]]
+*[[Cutinase 3D structures|Cutinase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Cutinase]]
+[[Category: Fusarium vanettenii]]
-[[Category: Fusso]]
+[[Category: Large Structures]]
-[[Category: Gros, P]]
+[[Category: Gros P]]
-[[Category: Lutz, M]]
+[[Category: Lutz M]]
-[[Category: Mannie, J P.B A]]
+[[Category: Mannie JPBA]]
-[[Category: Rutten, L]]
+[[Category: Rutten L]]
-[[Category: Glycoprotein]]
-[[Category: Hydrolase]]
-[[Category: Protein-metallopincer complex]]
-[[Category: Secreted]]
-[[Category: Serine esterase]]