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==The crystal structure of YfnB from Bacillus subtilis subsp. subtilis str. 168==
==The crystal structure of YfnB from Bacillus subtilis subsp. subtilis str. 168==
<StructureSection load='3ed5' size='340' side='right' caption='[[3ed5]], [[Resolution|resolution]] 1.72&Aring;' scene=''>
<StructureSection load='3ed5' size='340' side='right'caption='[[3ed5]], [[Resolution|resolution]] 1.72&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3ed5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ED5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ED5 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3ed5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ED5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ED5 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.72&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yfnB, BSU07330 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ed5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ed5 OCA], [https://pdbe.org/3ed5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ed5 RCSB], [https://www.ebi.ac.uk/pdbsum/3ed5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ed5 ProSAT], [https://www.topsan.org/Proteins/MCSG/3ed5 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ed5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ed5 OCA], [http://pdbe.org/3ed5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ed5 RCSB], [http://www.ebi.ac.uk/pdbsum/3ed5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ed5 ProSAT], [http://www.topsan.org/Proteins/MCSG/3ed5 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/YFNB_BACSU YFNB_BACSU]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ed/3ed5_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ed/3ed5_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Vibrio subtilis ehrenberg 1835]]
[[Category: Bacillus subtilis]]
[[Category: Jedrzejczak, R]]
[[Category: Large Structures]]
[[Category: Joachimiak, A]]
[[Category: Jedrzejczak R]]
[[Category: Structural genomic]]
[[Category: Joachimiak A]]
[[Category: Tan, K]]
[[Category: Tan K]]
[[Category: Wu, R]]
[[Category: Wu R]]
[[Category: Apc60080]]
[[Category: Bacillus subtilis subsp. subtilis str. 168]]
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Unknown function]]
[[Category: Yfnb]]

Latest revision as of 10:56, 9 October 2024

The crystal structure of YfnB from Bacillus subtilis subsp. subtilis str. 168The crystal structure of YfnB from Bacillus subtilis subsp. subtilis str. 168

Structural highlights

3ed5 is a 1 chain structure with sequence from Bacillus subtilis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.72Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

YFNB_BACSU

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3ed5, resolution 1.72Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA