3ci6: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
New page: left|200px <!-- The line below this paragraph, containing "STRUCTURE_3ci6", creates the "Structure Box" on the page. You may change the PDB parameter (which sets the PD...
 
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3ci6.jpg|left|200px]]


<!--
==Crystal structure of the GAF domain from Acinetobacter phosphoenolpyruvate-protein phosphotransferase==
The line below this paragraph, containing "STRUCTURE_3ci6", creates the "Structure Box" on the page.
<StructureSection load='3ci6' size='340' side='right'caption='[[3ci6]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ci6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baylyi_ADP1 Acinetobacter baylyi ADP1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CI6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CI6 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=P4G:1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE'>P4G</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
{{STRUCTURE_3ci6| PDB=3ci6 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ci6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ci6 OCA], [https://pdbe.org/3ci6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ci6 RCSB], [https://www.ebi.ac.uk/pdbsum/3ci6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ci6 ProSAT], [https://www.topsan.org/Proteins/MCSG/3ci6 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q6FEW8_ACIAD Q6FEW8_ACIAD]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ci/3ci6_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ci6 ConSurf].
<div style="clear:both"></div>


'''Crystal structure of the GAF domain from Acinetobacter phosphoenolpyruvate-protein phosphotransferase'''
==See Also==
 
*[[Phosphotransferase 3D structures|Phosphotransferase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3CI6 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Acinetobacter_sp._adp1 Acinetobacter sp. adp1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CI6 OCA].
[[Category: Acinetobacter baylyi ADP1]]
[[Category: Acinetobacter sp. adp1]]
[[Category: Large Structures]]
[[Category: Phosphoenolpyruvate--protein phosphotransferase]]
[[Category: Cuff ME]]
[[Category: Single protein]]
[[Category: Joachimiak A]]
[[Category: Cuff, M E.]]
[[Category: Kim Y]]
[[Category: Joachimiak, A.]]
[[Category: Shackelford G]]
[[Category: Kim, Y.]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Shackelford, G.]]
[[Category: Acinetobacter]]
[[Category: Cytoplasm]]
[[Category: Gaf domain]]
[[Category: Kinase]]
[[Category: Magnesium]]
[[Category: Mcsg]]
[[Category: Metal-binding]]
[[Category: Midwest center for structural genomic]]
[[Category: Pep-phosphotransferase]]
[[Category: Phosphotransferase system]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Pyruvate]]
[[Category: Structural genomic]]
[[Category: Sugar transport]]
[[Category: Transport]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 14 11:33:34 2008''

Latest revision as of 10:54, 9 October 2024

Crystal structure of the GAF domain from Acinetobacter phosphoenolpyruvate-protein phosphotransferaseCrystal structure of the GAF domain from Acinetobacter phosphoenolpyruvate-protein phosphotransferase

Structural highlights

3ci6 is a 2 chain structure with sequence from Acinetobacter baylyi ADP1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.55Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q6FEW8_ACIAD

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3ci6, resolution 1.55Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3ci6&oldid=4185907"