3bpk: Difference between revisions

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-[[Image:3bpk.jpg|left|200px]]
-<!--
+==Crystal structure of nitrilotriacetate monooxygenase component B from Bacillus cereus==
-The line below this paragraph, containing "STRUCTURE_3bpk", creates the "Structure Box" on the page.
+<StructureSection load='3bpk' size='340' side='right'caption='[[3bpk]], [[Resolution|resolution]] 1.56&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3bpk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus_ATCC_14579 Bacillus cereus ATCC 14579]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BPK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BPK FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.56&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-{{STRUCTURE_3bpk|  PDB=3bpk  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bpk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bpk OCA], [https://pdbe.org/3bpk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bpk RCSB], [https://www.ebi.ac.uk/pdbsum/3bpk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bpk ProSAT], [https://www.topsan.org/Proteins/MCSG/3bpk TOPSAN]</span></td></tr>
+</table>
-'''Crystal structure of nitrilotriacetate monooxygenase component B from Bacillus cereus'''
+== Function ==
+[https://www.uniprot.org/uniprot/Q814U7_BACCR Q814U7_BACCR]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-BPK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus_atcc_14579 Bacillus cereus atcc 14579]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BPK OCA].
+Check<jmol>
-[[Category: Bacillus cereus atcc 14579]]
+  <jmolCheckbox>
-[[Category: Single protein]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bp/3bpk_consurf.spt"</scriptWhenChecked>
-[[Category: Abdullah, J.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Joachimiak, A.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+  </jmolCheckbox>
-[[Category: Osipiuk, J.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bpk ConSurf].
-[[Category: Quartey, P.]]
+<div style="clear:both"></div>
-[[Category: Apc25244]]
+__TOC__
-[[Category: Mcsg]]
+</StructureSection>
-[[Category: Midwest center for structural genomic]]
+[[Category: Bacillus cereus ATCC 14579]]
-[[Category: Nitrilotriacetate monooxygenase]]
+[[Category: Large Structures]]
-[[Category: Oxidoreductase]]
+[[Category: Abdullah J]]
-[[Category: Protein structure initiative]]
+[[Category: Joachimiak A]]
-[[Category: Psi-2]]
+[[Category: Osipiuk J]]
-[[Category: Structural genomic]]
+[[Category: Quartey P]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 20:58:41 2008''