2vlc: Difference between revisions

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-{{Seed}}
-[[Image:2vlc.jpg|left|200px]]
-<!--
+==Crystal structure of Natural Cinnamomin (Isoform III)==
-The line below this paragraph, containing "STRUCTURE_2vlc", creates the "Structure Box" on the page.
+<StructureSection load='2vlc' size='340' side='right'caption='[[2vlc]], [[Resolution|resolution]] 2.95&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2vlc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cinnamomum_camphora Cinnamomum camphora]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VLC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VLC FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.95&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr>
-{{STRUCTURE_2vlc|  PDB=2vlc  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vlc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vlc OCA], [https://pdbe.org/2vlc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vlc RCSB], [https://www.ebi.ac.uk/pdbsum/2vlc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vlc ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q94BW3_CINCA Q94BW3_CINCA]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vl/2vlc_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vlc ConSurf].
+<div style="clear:both"></div>
-===CRYSTAL STRUCTURE OF NATURAL CINNAMOMIN (ISOFORM III)===
+==See Also==
+*[[Ribosome inactivating protein 3D structures|Ribosome inactivating protein 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-VLC is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Cinnamomum_camphora Cinnamomum camphora]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VLC OCA].
-==Reference==
-<ref group="xtra">PMID:18837036</ref><references group="xtra"/>
 [[Category: Cinnamomum camphora]]
-[[Category: RRNA N-glycosylase]]
+[[Category: Large Structures]]
-[[Category: Azzi, A.]]
+[[Category: Azzi A]]
-[[Category: Lin, S X.]]
+[[Category: Lin S-X]]
-[[Category: Liu, W Y.]]
+[[Category: Liu W-Y]]
-[[Category: Wang, T.]]
+[[Category: Wang T]]
-[[Category: Zhu, D W.]]
+[[Category: Zhu D-W]]
-[[Category: Zou, Y S.]]
+[[Category: Zou Y-S]]
-[[Category: Cinnamomin]]
-[[Category: Hydrolase]]
-[[Category: N-glycosidase]]
-[[Category: Plant defense]]
-[[Category: Protein synthesis inhibitor]]
-[[Category: Ribosome inhibiting protein]]
-[[Category: Toxin]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 11 12:36:51 2009''