2r39: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
New page: left|200px<br /><applet load="2r39" size="350" color="white" frame="true" align="right" spinBox="true" caption="2r39, resolution 2.02Å" /> '''Crystal structure of...
 
No edit summary
 
(15 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2r39.jpg|left|200px]]<br /><applet load="2r39" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2r39, resolution 2.02&Aring;" />
'''Crystal structure of FixG-related protein from Vibrio parahaemolyticus'''<br />


==About this Structure==
==Crystal structure of FixG-related protein from Vibrio parahaemolyticus==
2R39 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_rimd_2210633 Vibrio parahaemolyticus rimd 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R39 OCA].  
<StructureSection load='2r39' size='340' side='right'caption='[[2r39]], [[Resolution|resolution]] 2.02&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Vibrio parahaemolyticus rimd 2210633]]
<table><tr><td colspan='2'>[[2r39]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_RIMD_2210633 Vibrio parahaemolyticus RIMD 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R39 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R39 FirstGlance]. <br>
[[Category: Abdullah, J.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.02&#8491;</td></tr>
[[Category: Bigelow, L.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Chang, C.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r39 OCA], [https://pdbe.org/2r39 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r39 RCSB], [https://www.ebi.ac.uk/pdbsum/2r39 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r39 ProSAT], [https://www.topsan.org/Proteins/MCSG/2r39 TOPSAN]</span></td></tr>
[[Category: Joachimiak, A.]]
</table>
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
== Function ==
[[Category: 4fe-4s]]
[https://www.uniprot.org/uniprot/Q87KC5_VIBPA Q87KC5_VIBPA]  
[[Category: fixg-related protein]]
== Evolutionary Conservation ==
[[Category: iron]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: iron-sulfur]]
Check<jmol>
[[Category: mcsg]]
  <jmolCheckbox>
[[Category: metal-binding]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r3/2r39_consurf.spt"</scriptWhenChecked>
[[Category: midwest center for structural genomics]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: protein structure initiative]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: psi-2]]
  </jmolCheckbox>
[[Category: structural genomics]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r39 ConSurf].
[[Category: unknown function]]
<div style="clear:both"></div>
[[Category: vibrio parahaemolyticus]]
__TOC__
 
</StructureSection>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 13:41:11 2008''
[[Category: Large Structures]]
[[Category: Vibrio parahaemolyticus RIMD 2210633]]
[[Category: Abdullah J]]
[[Category: Bigelow L]]
[[Category: Chang C]]
[[Category: Joachimiak A]]

Latest revision as of 10:46, 9 October 2024

Crystal structure of FixG-related protein from Vibrio parahaemolyticusCrystal structure of FixG-related protein from Vibrio parahaemolyticus

Structural highlights

2r39 is a 1 chain structure with sequence from Vibrio parahaemolyticus RIMD 2210633. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.02Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q87KC5_VIBPA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2r39, resolution 2.02Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2r39&oldid=4185703"