2gs9: Difference between revisions

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-[[Image:2gs9.jpg|left|200px]]
- {{Structure
+==Crystal structure of TT1324 from Thermus thermophilis HB8==
-|PDB= 2gs9 |SIZE=350|CAPTION= <scene name='initialview01'>2gs9</scene>, resolution 2.60&Aring;
+<StructureSection load='2gs9' size='340' side='right'caption='[[2gs9]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>
+<table><tr><td colspan='2'>[[2gs9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GS9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GS9 FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-|GENE=
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
-|DOMAIN=
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gs9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gs9 OCA], [https://pdbe.org/2gs9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gs9 RCSB], [https://www.ebi.ac.uk/pdbsum/2gs9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gs9 ProSAT], [https://www.topsan.org/Proteins/RSGI/2gs9 TOPSAN]</span></td></tr>
-|RELATEDENTRY=
+</table>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gs9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gs9 OCA], [http://www.ebi.ac.uk/pdbsum/2gs9 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2gs9 RCSB]</span>
+== Function ==
-}}
+[https://www.uniprot.org/uniprot/Q5SL11_THET8 Q5SL11_THET8]
+== Evolutionary Conservation ==
-'''Crystal structure of TT1324 from Thermus thermophilis HB8'''
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
-==About this Structure==
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gs/2gs9_consurf.spt"</scriptWhenChecked>
-GS9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GS9 OCA].
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Single protein]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Thermus thermophilus]]
+  </jmolCheckbox>
-[[Category: Abe, A.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gs9 ConSurf].
-[[Category: Agari, Y.]]
+<div style="clear:both"></div>
-[[Category: Ebihara, A.]]
+__TOC__
-[[Category: Kamitori, S.]]
+</StructureSection>
-[[Category: Kanagawa, M.]]
+[[Category: Large Structures]]
-[[Category: Kuramitsu, S.]]
+[[Category: Thermus thermophilus HB8]]
-[[Category: Kuroishi, C.]]
+[[Category: Abe A]]
-[[Category: Nakagawa, N.]]
+[[Category: Agari Y]]
-[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+[[Category: Ebihara A]]
-[[Category: Yokoyama, S.]]
+[[Category: Kamitori S]]
-[[Category: methyl transferase]]
+[[Category: Kanagawa M]]
-[[Category: national project on protein structural and functional analyse]]
+[[Category: Kuramitsu S]]
-[[Category: nppsfa]]
+[[Category: Kuroishi C]]
-[[Category: riken structural genomics/proteomics initiative]]
+[[Category: Nakagawa N]]
-[[Category: rsgi]]
+[[Category: Yokoyama S]]
-[[Category: structural genomic]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:20:52 2008''