2dyc: Difference between revisions

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{{Seed}}
[[Image:2dyc.png|left|200px]]


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==Crystal structure of the N-terminal domain of mouse galectin-4==
The line below this paragraph, containing "STRUCTURE_2dyc", creates the "Structure Box" on the page.
<StructureSection load='2dyc' size='340' side='right'caption='[[2dyc]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2dyc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DYC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DYC FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2dyc| PDB=2dyc |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dyc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dyc OCA], [https://pdbe.org/2dyc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dyc RCSB], [https://www.ebi.ac.uk/pdbsum/2dyc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dyc ProSAT], [https://www.topsan.org/Proteins/RSGI/2dyc TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/LEG4_MOUSE LEG4_MOUSE] Galectin that binds lactose and a related range of sugars (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dy/2dyc_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dyc ConSurf].
<div style="clear:both"></div>


===Crystal structure of the N-terminal domain of mouse galectin-4===
==See Also==
 
*[[Galectin 3D structures|Galectin 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2DYC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DYC OCA].
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
[[Category: Single protein]]
[[Category: Kato-Murayama M]]
[[Category: Kato-Murayama, M.]]
[[Category: Murayama K]]
[[Category: Murayama, K.]]
[[Category: Shirouzu M]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Terada T]]
[[Category: Shirouzu, M.]]
[[Category: Yokoyama S]]
[[Category: Terada, T.]]
[[Category: Yokoyama, S.]]
[[Category: Gal-bind lectin]]
[[Category: Galectin]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Structural genomic]]
[[Category: Sugar binding]]
[[Category: Sugar binding protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 20:08:06 2008''

Latest revision as of 10:36, 9 October 2024

Crystal structure of the N-terminal domain of mouse galectin-4Crystal structure of the N-terminal domain of mouse galectin-4

Structural highlights

2dyc is a 1 chain structure with sequence from Mus musculus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.4Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

LEG4_MOUSE Galectin that binds lactose and a related range of sugars (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2dyc, resolution 2.40Å

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OCA
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