2cx3: Difference between revisions

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New page: left|200px<br /><applet load="2cx3" size="350" color="white" frame="true" align="right" spinBox="true" caption="2cx3, resolution 2.64Å" /> '''Crystal structure of...
 
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[[Image:2cx3.gif|left|200px]]<br /><applet load="2cx3" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2cx3, resolution 2.64&Aring;" />
'''Crystal structure of a bacterioferritin comigratory protein peroxiredoxin from the Aeropyrum pernix K1 (form-1 crystal)'''<br />


==About this Structure==
==Crystal structure of a bacterioferritin comigratory protein peroxiredoxin from the Aeropyrum pernix K1 (form-1 crystal)==
2CX3 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Aeropyrum_pernix_k1 Aeropyrum pernix k1]. Active as [http://en.wikipedia.org/wiki/Peroxiredoxin Peroxiredoxin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.15 1.11.1.15] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CX3 OCA].  
<StructureSection load='2cx3' size='340' side='right'caption='[[2cx3]], [[Resolution|resolution]] 2.64&Aring;' scene=''>
[[Category: Aeropyrum pernix k1]]
== Structural highlights ==
[[Category: Peroxiredoxin]]
<table><tr><td colspan='2'>[[2cx3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeropyrum_pernix_K1 Aeropyrum pernix K1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CX3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CX3 FirstGlance]. <br>
[[Category: Single protein]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.64&#8491;</td></tr>
[[Category: Idaka, M.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Mizohata, E.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cx3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cx3 OCA], [https://pdbe.org/2cx3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cx3 RCSB], [https://www.ebi.ac.uk/pdbsum/2cx3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cx3 ProSAT], [https://www.topsan.org/Proteins/RSGI/2cx3 TOPSAN]</span></td></tr>
[[Category: Murayama, K.]]
</table>
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
== Function ==
[[Category: Shirouzu, M.]]
[https://www.uniprot.org/uniprot/Q9YA14_AERPE Q9YA14_AERPE]  
[[Category: Tatsuguchi, A.]]
== Evolutionary Conservation ==
[[Category: Terada, T.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Yokoyama, S.]]
Check<jmol>
[[Category: antioxidant enzyme]]
  <jmolCheckbox>
[[Category: national project on protein structural and functional analyses]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cx/2cx3_consurf.spt"</scriptWhenChecked>
[[Category: nppsfa]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: oxidoreductase]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: reactive oxygen species]]
  </jmolCheckbox>
[[Category: riken structural genomics/proteomics initiative]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cx3 ConSurf].
[[Category: rsgi]]
<div style="clear:both"></div>
[[Category: structural genomics]]
[[Category: thioredoxin fold]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 18:50:19 2008''
==See Also==
*[[Bacterioferritin comigratory protein|Bacterioferritin comigratory protein]]
*[[Peroxiredoxin 3D structures|Peroxiredoxin 3D structures]]
__TOC__
</StructureSection>
[[Category: Aeropyrum pernix K1]]
[[Category: Large Structures]]
[[Category: Idaka M]]
[[Category: Mizohata E]]
[[Category: Murayama K]]
[[Category: Shirouzu M]]
[[Category: Tatsuguchi A]]
[[Category: Terada T]]
[[Category: Yokoyama S]]

Latest revision as of 10:35, 9 October 2024

Crystal structure of a bacterioferritin comigratory protein peroxiredoxin from the Aeropyrum pernix K1 (form-1 crystal)Crystal structure of a bacterioferritin comigratory protein peroxiredoxin from the Aeropyrum pernix K1 (form-1 crystal)

Structural highlights

2cx3 is a 4 chain structure with sequence from Aeropyrum pernix K1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.64Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q9YA14_AERPE

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2cx3, resolution 2.64Å

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