2ebv: Difference between revisions

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[[Image:2ebv.jpg|left|200px]]


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==Solution structure of the third zf-RanBP domain from human Nuclear pore complex protein Nup153==
The line below this paragraph, containing "STRUCTURE_2ebv", creates the "Structure Box" on the page.
<StructureSection load='2ebv' size='340' side='right'caption='[[2ebv]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2ebv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EBV FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_2ebv| PDB=2ebv |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ebv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ebv OCA], [https://pdbe.org/2ebv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ebv RCSB], [https://www.ebi.ac.uk/pdbsum/2ebv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ebv ProSAT], [https://www.topsan.org/Proteins/RSGI/2ebv TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/NU153_HUMAN NU153_HUMAN] Possible DNA-binding subunit of the nuclear pore complex (NPC). The repeat-containing domain may be involved in anchoring components of the pore complex to the pore membrane.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eb/2ebv_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ebv ConSurf].
<div style="clear:both"></div>


'''Solution structure of the third zf-RanBP domain from human Nuclear pore complex protein Nup153'''
==See Also==
 
*[[Nucleoporin 3D structures|Nucleoporin 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2EBV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBV OCA].
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Hayashi, F.]]
[[Category: Hayashi F]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S.]]
[[Category: Zhang HP]]
[[Category: Zhang, H P.]]
[[Category: 153 kda nucleoporin]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Nuclear pore complex protein]]
[[Category: Nucleoporin nup153]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Structural genomic]]
[[Category: Transport protein]]
[[Category: Zf-ranbp domain]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 02:18:03 2008''

Latest revision as of 21:49, 29 May 2024

Solution structure of the third zf-RanBP domain from human Nuclear pore complex protein Nup153Solution structure of the third zf-RanBP domain from human Nuclear pore complex protein Nup153

Structural highlights

2ebv is a 1 chain structure with sequence from Homo sapiens. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solution NMR
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

NU153_HUMAN Possible DNA-binding subunit of the nuclear pore complex (NPC). The repeat-containing domain may be involved in anchoring components of the pore complex to the pore membrane.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

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