2cz4: Difference between revisions

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-[[Image:2cz4.gif|left|200px]]
-<!--
+==Crystal structure of a putative PII-like signaling protein (TTHA0516) from Thermus thermophilus HB8==
-The line below this paragraph, containing "STRUCTURE_2cz4", creates the "Structure Box" on the page.
+<StructureSection load='2cz4' size='340' side='right'caption='[[2cz4]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2cz4]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CZ4 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-{{STRUCTURE_2cz4|  PDB=2cz4  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cz4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cz4 OCA], [https://pdbe.org/2cz4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cz4 RCSB], [https://www.ebi.ac.uk/pdbsum/2cz4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cz4 ProSAT], [https://www.topsan.org/Proteins/RSGI/2cz4 TOPSAN]</span></td></tr>
+</table>
-'''Crystal structure of a putative PII-like signaling protein (TTHA0516) from Thermus thermophilus HB8'''
+== Function ==
+[https://www.uniprot.org/uniprot/Q5SKX7_THET8 Q5SKX7_THET8]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-CZ4 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ4 OCA].
+Check<jmol>
-[[Category: Single protein]]
+  <jmolCheckbox>
-[[Category: Thermus thermophilus]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cz/2cz4_consurf.spt"</scriptWhenChecked>
-[[Category: Arai, R.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Fusatomi, E.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Kawaguchi, S.]]
+  </jmolCheckbox>
-[[Category: Kukimoto-Niino, M.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cz4 ConSurf].
-[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+<div style="clear:both"></div>
-[[Category: Shirouzu, M.]]
+__TOC__
-[[Category: Terada, T.]]
+</StructureSection>
-[[Category: Yokoyama, S.]]
+[[Category: Large Structures]]
-[[Category: Conserved hypothetical protein]]
+[[Category: Thermus thermophilus HB8]]
-[[Category: National project on protein structural and functional analyse]]
+[[Category: Arai R]]
-[[Category: Nppsfa]]
+[[Category: Fusatomi E]]
-[[Category: Pii-like signaling protein]]
+[[Category: Kawaguchi S]]
-[[Category: Riken structural genomics/proteomics initiative]]
+[[Category: Kukimoto-Niino M]]
-[[Category: Rsgi]]
+[[Category: Shirouzu M]]
-[[Category: Structural genomic]]
+[[Category: Terada T]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 23:23:07 2008''
+[[Category: Yokoyama S]]