2ql0: Difference between revisions

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-{{Seed}}
-[[Image:2ql0.jpg|left|200px]]
-<!--
+==Zinc-substituted Rubredoxin from Desulfovibrio Vulgaris==
-The line below this paragraph, containing "STRUCTURE_2ql0", creates the "Structure Box" on the page.
+<StructureSection load='2ql0' size='340' side='right'caption='[[2ql0]]' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2ql0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QL0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QL0 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-{{STRUCTURE_2ql0|  PDB=2ql0  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ql0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ql0 OCA], [https://pdbe.org/2ql0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ql0 RCSB], [https://www.ebi.ac.uk/pdbsum/2ql0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ql0 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/RUBR_DESVH RUBR_DESVH] Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule.  Electron acceptor for cytoplasmic lactate dehydrogenase.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ql/2ql0_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ql0 ConSurf].
+<div style="clear:both"></div>
-===Zinc-substituted Rubredoxin from Desulfovibrio Vulgaris===
+==See Also==
+*[[Rubredoxin 3D structures|Rubredoxin 3D structures]]
+*[[Rubredoxin PDB structures|Rubredoxin PDB structures]]
-==About this Structure==
+__TOC__
-QL0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QL0 OCA].
+</StructureSection>
 [[Category: Desulfovibrio vulgaris]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: Duarte, I C.]]
+[[Category: Duarte IC]]
-[[Category: Goodfellow, B J.]]
+[[Category: Goodfellow BJ]]
-[[Category: Macedo, A L.]]
+[[Category: Macedo AL]]
-[[Category: Markley, J L.]]
+[[Category: Markley JL]]
-[[Category: Moura, I.]]
+[[Category: Moura I]]
-[[Category: Moura, J G.]]
+[[Category: Moura JG]]
-[[Category: Nunes, S G.]]
+[[Category: Nunes SG]]
-[[Category: Volkman, B F.]]
+[[Category: Volkman BF]]
-[[Category: Electron transport]]
-[[Category: Iron]]
-[[Category: Metal-binding]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul  9 10:39:35 2008''