2p80: Difference between revisions

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==Solution structure of the complex between nitrite reductase and pseudoazurin from A. faecalis==
==Solution structure of the complex between nitrite reductase and pseudoazurin from A. faecalis==
<StructureSection load='2p80' size='340' side='right' caption='[[2p80]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='2p80' size='340' side='right'caption='[[2p80]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2p80]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Alcfa Alcfa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P80 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2P80 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2p80]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Alcaligenes_faecalis Alcaligenes faecalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P80 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P80 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GD:GADOLINIUM+ATOM'>GD</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1sjm|1sjm]], [[3paz|3paz]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GD:GADOLINIUM+ATOM'>GD</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nirK, nir ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=511 ALCFA])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p80 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p80 OCA], [https://pdbe.org/2p80 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p80 RCSB], [https://www.ebi.ac.uk/pdbsum/2p80 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p80 ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nitrite_reductase_(NO-forming) Nitrite reductase (NO-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.2.1 1.7.2.1] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p80 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p80 OCA], [http://pdbe.org/2p80 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2p80 RCSB], [http://www.ebi.ac.uk/pdbsum/2p80 PDBsum]</span></td></tr>
</table>
</table>
{{Large structure}}
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/AZUP_ALCFA AZUP_ALCFA]] This soluble electron transfer copper protein is required for the inactivation of copper-containing nitrite reductase in the presence of oxygen. Serves as a direct electron donor to the nitrite reductase.
[https://www.uniprot.org/uniprot/NIR_ALCFA NIR_ALCFA]  
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p8/2p80_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p8/2p80_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
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==See Also==
==See Also==
*[[Nitric reductase|Nitric reductase]]
*[[Nitrite reductase 3D structures|Nitrite reductase 3D structures]]
*[[Pseudoazurin|Pseudoazurin]]
*[[Pseudoazurin|Pseudoazurin]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Alcfa]]
[[Category: Alcaligenes faecalis]]
[[Category: Ubbink, M]]
[[Category: Large Structures]]
[[Category: Vlasie, M D]]
[[Category: Ubbink M]]
[[Category: Electron transfer]]
[[Category: Vlasie MD]]
[[Category: Oxidoreductase]]
[[Category: Protein-protein interaction]]
[[Category: Redox partner]]
[[Category: Transient complex]]

Latest revision as of 12:43, 22 May 2024

Solution structure of the complex between nitrite reductase and pseudoazurin from A. faecalisSolution structure of the complex between nitrite reductase and pseudoazurin from A. faecalis

Structural highlights

2p80 is a 4 chain structure with sequence from Alcaligenes faecalis. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solution NMR
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

NIR_ALCFA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

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