1qvp: Difference between revisions

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 ==C terminal SH3-like domain from Diphtheria toxin Repressor residues 144-226.==
-<StructureSection load='1qvp' size='340' side='right' caption='[[1qvp]], [[NMR_Ensembles_of_Models | 13 NMR models]]' scene=''>
+<StructureSection load='1qvp' size='340' side='right'caption='[[1qvp]]' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1qvp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Corynebacterium_diphtheriae Corynebacterium diphtheriae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1QVP FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1qvp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_diphtheriae Corynebacterium diphtheriae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QVP FirstGlance]. <br>
-</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1bym|1bym]]</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DTXR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1717 Corynebacterium diphtheriae])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qvp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qvp OCA], [https://pdbe.org/1qvp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qvp RCSB], [https://www.ebi.ac.uk/pdbsum/1qvp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qvp ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1qvp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qvp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1qvp RCSB], [http://www.ebi.ac.uk/pdbsum/1qvp PDBsum]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/DTXR_CORDI DTXR_CORDI]] Iron-binding repressor of the dipheteria toxin gene expression. May serve as a global regulator of gene expression. Represses ripA under iron excess.
+[https://www.uniprot.org/uniprot/DTXR_CORDI DTXR_CORDI] Iron-binding repressor of the dipheteria toxin gene expression. May serve as a global regulator of gene expression. Represses ripA under iron excess.
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qv/1qvp_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qv/1qvp_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1qvp ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 27: / Line 27: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 1qvp" style="background-color:#fffaf0;"></div>
 ==See Also==
@@ Line 35: / Line 36: @@
 </StructureSection>
 [[Category: Corynebacterium diphtheriae]]
-[[Category: Bhattacharya, N]]
+[[Category: Large Structures]]
-[[Category: Bienkiewicz, E A]]
+[[Category: Bhattacharya N]]
-[[Category: Logan, T M]]
+[[Category: Bienkiewicz EA]]
-[[Category: Love, J F]]
+[[Category: Logan TM]]
-[[Category: Marin, V]]
+[[Category: Love JF]]
-[[Category: Murphy, J R]]
+[[Category: Marin V]]
-[[Category: Rangachari, V]]
+[[Category: Murphy JR]]
-[[Category: Wylie, G P]]
+[[Category: Rangachari V]]
-[[Category: C-terminal domain]]
+[[Category: Wylie GP]]
-[[Category: Dna binding protein]]
-[[Category: Dtxr]]
-[[Category: Gene regulation]]
-[[Category: Peptide-binding]]
-[[Category: Prokaryotic sh3 domain]]
-[[Category: Repressor]]
-[[Category: Transcription regulation]]