1fr5: Difference between revisions

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OCA

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 ==PHAGE FR CAPSIDS WITH A FOUR RESIDUE DELETION IN THE COAT PROTEIN FG LOOP==
-<StructureSection load='1fr5' size='340' side='right' caption='[[1fr5]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
+<StructureSection load='1fr5' size='340' side='right'caption='[[1fr5]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1fr5]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bpfr Bpfr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FR5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1FR5 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1fr5]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterobacteria_phage_fr Enterobacteria phage fr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FR5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1FR5 FirstGlance]. <br>
-</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1fr5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fr5 OCA], [http://pdbe.org/1fr5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1fr5 RCSB], [http://www.ebi.ac.uk/pdbsum/1fr5 PDBsum]</span></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.5&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1fr5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fr5 OCA], [https://pdbe.org/1fr5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1fr5 RCSB], [https://www.ebi.ac.uk/pdbsum/1fr5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1fr5 ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/COAT_BPFR COAT_BPFR]] Forms the phage shell; binds to the phage RNA.
+[https://www.uniprot.org/uniprot/CAPSD_BPFR CAPSD_BPFR] Capsid protein self-assembles to form an icosahedral capsid with a T=3 symmetry, about 26 nm in diameter, and consisting of 89 capsid proteins dimers (178 capsid proteins). Involved in viral genome encapsidation through the interaction between a capsid protein dimer and the multiple packaging signals present in the RNA genome. The capsid contains also 1 copy of the A2 maturation protein.[UniProtKB:P03612]  Acts as a translational repressor of viral replicase synthesis late in infection. This latter function is the result of capsid protein interaction with an RNA hairpin which contains the replicase ribosome-binding site.[UniProtKB:P03612]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 16: / Line 18: @@
 </div>
 <div class="pdbe-citations 1fr5" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Bpfr]]
+[[Category: Enterobacteria phage fr]]
-[[Category: Axblom, C]]
+[[Category: Large Structures]]
-[[Category: Bundule, M]]
+[[Category: Axblom C]]
-[[Category: Fridborg, K]]
+[[Category: Bundule M]]
-[[Category: Liljas, L]]
+[[Category: Fridborg K]]
-[[Category: Orna, L]]
+[[Category: Liljas L]]
-[[Category: Tars, K]]
+[[Category: Orna L]]
-[[Category: Capsid]]
+[[Category: Tars K]]
-[[Category: Icosahedral virus]]
-[[Category: Viral coat protein]]
-[[Category: Virus]]