1ajy: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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 ==STRUCTURE AND MOBILITY OF THE PUT3 DIMER: A DNA PINCER, NMR, 13 STRUCTURES==
-<StructureSection load='1ajy' size='340' side='right' caption='[[1ajy]], [[NMR_Ensembles_of_Models | 13 NMR models]]' scene=''>
+<StructureSection load='1ajy' size='340' side='right'caption='[[1ajy]]' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1ajy]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AJY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1AJY FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1ajy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AJY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1AJY FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ajy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ajy OCA], [http://pdbe.org/1ajy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ajy RCSB], [http://www.ebi.ac.uk/pdbsum/1ajy PDBsum]</span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ajy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ajy OCA], [https://pdbe.org/1ajy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ajy RCSB], [https://www.ebi.ac.uk/pdbsum/1ajy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ajy ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/PUT3_YEAST PUT3_YEAST]] Positive activator of the proline utilization pathway. Binds to the promoters of PUT1 and PUT2 genes. Recognizes and binds to the DNA sequence 5'-CGG-N(10)-CCG-3'.
+[https://www.uniprot.org/uniprot/PUT3_YEAST PUT3_YEAST] Positive activator of the proline utilization pathway. Binds to the promoters of PUT1 and PUT2 genes. Recognizes and binds to the DNA sequence 5'-CGG-N(10)-CCG-3'.
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aj/1ajy_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aj/1ajy_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
@@ Line 31: / Line 33: @@
 __TOC__
 </StructureSection>
+[[Category: Large Structures]]
 [[Category: Saccharomyces cerevisiae]]
-[[Category: Dayie, K T]]
+[[Category: Dayie KT]]
-[[Category: Ptashne, M]]
+[[Category: Ptashne M]]
-[[Category: Reece, R J]]
+[[Category: Reece RJ]]
-[[Category: Wagner, G]]
+[[Category: Wagner G]]
-[[Category: Walters, K J]]
+[[Category: Walters KJ]]
-[[Category: Put3]]
-[[Category: Transcription regulation]]