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New page: left|200px<br /><applet load="2afd" size="350" color="white" frame="true" align="right" spinBox="true" caption="2afd" /> '''Solution Structure of Asl1650, an Acyl Carri... |
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== | ==Solution Structure of Asl1650, an Acyl Carrier Protein from Anabaena sp. PCC 7120 with a Variant Phosphopantetheinylation-Site Sequence== | ||
Cyanobacteria, such as Anabaena, produce a variety of bioactive natural | <StructureSection load='2afd' size='340' side='right'caption='[[2afd]]' scene=''> | ||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2afd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nostoc_sp._PCC_7120_=_FACHB-418 Nostoc sp. PCC 7120 = FACHB-418]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AFD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AFD FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2afd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2afd OCA], [https://pdbe.org/2afd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2afd RCSB], [https://www.ebi.ac.uk/pdbsum/2afd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2afd ProSAT], [https://www.topsan.org/Proteins/JCSG/2afd TOPSAN]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/Q8YWG3_NOSS1 Q8YWG3_NOSS1] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/af/2afd_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2afd ConSurf]. | |||
<div style="clear:both"></div> | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Cyanobacteria, such as Anabaena, produce a variety of bioactive natural products via polyketide synthases (PKS), nonribosomal peptide synthetases (NRPS), and hybrid peptide/polyketide pathways. The protein Asl1650, which is a member of the acyl carrier protein family from the cyanobacterium Anabaena sp. PCC 7120, is encoded in a region of the Anabaena genome that is rich in PKS and NRPS genes. To gain new insight into the physiological role of acyl carriers in Anabaena, the solution structure of Asl1650 has been solved by NMR spectroscopy. The protein adopts a twisted antiparallel four-helix bundle fold, with a variant phosphopantetheine-attachment motif positioned at the start of the second helix. Structure comparisons with proteins from other organisms suggest a likely physiological function as a discrete peptidyl carrier protein. | |||
Solution structure of Asl1650, an acyl carrier protein from Anabaena sp. PCC 7120 with a variant phosphopantetheinylation-site sequence.,Johnson MA, Peti W, Herrmann T, Wilson IA, Wuthrich K Protein Sci. 2006 May;15(5):1030-41. Epub 2006 Apr 5. PMID:16597827<ref>PMID:16597827</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
</div> | |||
[[Category: | <div class="pdbe-citations 2afd" style="background-color:#fffaf0;"></div> | ||
[[Category: | == References == | ||
[[Category: Herrmann | <references/> | ||
__TOC__ | |||
[[Category: Johnson | </StructureSection> | ||
[[Category: Peti | [[Category: Large Structures]] | ||
[[Category: Wilson | [[Category: Nostoc sp. PCC 7120 = FACHB-418]] | ||
[[Category: Wuthrich | [[Category: Herrmann T]] | ||
[[Category: Johnson MA]] | |||
[[Category: Peti W]] | |||
[[Category: Wilson IA]] | |||
[[Category: Wuthrich K]] | |||
Latest revision as of 11:17, 15 May 2024
Solution Structure of Asl1650, an Acyl Carrier Protein from Anabaena sp. PCC 7120 with a Variant Phosphopantetheinylation-Site SequenceSolution Structure of Asl1650, an Acyl Carrier Protein from Anabaena sp. PCC 7120 with a Variant Phosphopantetheinylation-Site Sequence
Structural highlights
FunctionEvolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. Publication Abstract from PubMedCyanobacteria, such as Anabaena, produce a variety of bioactive natural products via polyketide synthases (PKS), nonribosomal peptide synthetases (NRPS), and hybrid peptide/polyketide pathways. The protein Asl1650, which is a member of the acyl carrier protein family from the cyanobacterium Anabaena sp. PCC 7120, is encoded in a region of the Anabaena genome that is rich in PKS and NRPS genes. To gain new insight into the physiological role of acyl carriers in Anabaena, the solution structure of Asl1650 has been solved by NMR spectroscopy. The protein adopts a twisted antiparallel four-helix bundle fold, with a variant phosphopantetheine-attachment motif positioned at the start of the second helix. Structure comparisons with proteins from other organisms suggest a likely physiological function as a discrete peptidyl carrier protein. Solution structure of Asl1650, an acyl carrier protein from Anabaena sp. PCC 7120 with a variant phosphopantetheinylation-site sequence.,Johnson MA, Peti W, Herrmann T, Wilson IA, Wuthrich K Protein Sci. 2006 May;15(5):1030-41. Epub 2006 Apr 5. PMID:16597827[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. References
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