2a56: Difference between revisions

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OCA

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 ==fluorescent protein asFP595, A143S, on-state, 5min irradiation==
-<StructureSection load='2a56' size='340' side='right' caption='[[2a56]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+<StructureSection load='2a56' size='340' side='right'caption='[[2a56]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2a56]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Anemonia_sulcata Anemonia sulcata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A56 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2A56 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2a56]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Anemonia_sulcata Anemonia sulcata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A56 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2A56 FirstGlance]. <br>
-</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NRQ:{(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO)PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>NRQ</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2a50|2a50]], [[2a52|2a52]], [[2a53|2a53]], [[2a54|2a54]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NRQ:{(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO)PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>NRQ</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a56 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a56 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2a56 RCSB], [http://www.ebi.ac.uk/pdbsum/2a56 PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2a56 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a56 OCA], [https://pdbe.org/2a56 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2a56 RCSB], [https://www.ebi.ac.uk/pdbsum/2a56 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2a56 ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/NFCP_ANESU NFCP_ANESU]] Pigment protein that is intensely purple in color.<ref>PMID:10852900</ref>
+[https://www.uniprot.org/uniprot/NFCP_ANESU NFCP_ANESU] Pigment protein that is intensely purple in color.<ref>PMID:10852900</ref>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a5/2a56_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a5/2a56_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2a56 ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 27: / Line 28: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 2a56" style="background-color:#fffaf0;"></div>
 == References ==
 <references/>
@@ Line 32: / Line 34: @@
 </StructureSection>
 [[Category: Anemonia sulcata]]
-[[Category: Andresen, M]]
+[[Category: Large Structures]]
-[[Category: Eggeling, C]]
+[[Category: Andresen M]]
-[[Category: Graeter, F]]
+[[Category: Eggeling C]]
-[[Category: Grubmueller, H]]
+[[Category: Graeter F]]
-[[Category: Hell, S W]]
+[[Category: Grubmueller H]]
-[[Category: Jakobs, S]]
+[[Category: Hell SW]]
-[[Category: Schaefer, L]]
+[[Category: Jakobs S]]
-[[Category: Stiel, A C]]
+[[Category: Schaefer L]]
-[[Category: Trowitzsch, S]]
+[[Category: Stiel AC]]
-[[Category: Wahl, M C]]
+[[Category: Trowitzsch S]]
-[[Category: Weber, G]]
+[[Category: Wahl MC]]
-[[Category: Ascp]]
+[[Category: Weber G]]
-[[Category: Chromoprotein]]
-[[Category: Fluorescent protein]]
-[[Category: Luminescent protein]]
-[[Category: Photochromic protein]]
-[[Category: Reversible photoswitch]]