1zwm: Difference between revisions

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[[Image:1zwm.gif|left|200px]]


{{Structure
==NMR structure of murine gamma-S crystallin==
|PDB= 1zwm |SIZE=350|CAPTION= <scene name='initialview01'>1zwm</scene>
<StructureSection load='1zwm' size='340' side='right'caption='[[1zwm]]' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[1zwm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZWM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZWM FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
|GENE= Crygs ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zwm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zwm OCA], [https://pdbe.org/1zwm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zwm RCSB], [https://www.ebi.ac.uk/pdbsum/1zwm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zwm ProSAT]</span></td></tr>
|DOMAIN=
</table>
|RELATEDENTRY=[[1amm|1AMM]], [[1hk0|1HK0]], [[1a7h|1A7H]], [[1a45|1A45]], [[1a5d|1A5D]], [[1ag4|1AG4]], [[1zwo|1ZWO]]
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zwm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zwm OCA], [http://www.ebi.ac.uk/pdbsum/1zwm PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1zwm RCSB]</span>
[https://www.uniprot.org/uniprot/CRYGS_MOUSE CRYGS_MOUSE] Crystallins are the dominant structural components of the vertebrate eye lens.
}}
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zw/1zwm_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zwm ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The solution structure of murine gammaS-crystallin (gammaS) has been determined by multidimensional triple resonance NMR spectroscopy, using restraints derived from two sets of dipolar couplings, recorded in different alignment media, and supplemented by a small number of NOE distance restraints. gammaS consists of two topologically similar domains, arranged with an approximate twofold symmetry, and each domain shows close structural homology to closely related (approximately 50% sequence identity) domains found in other members of the gamma-crystallin family. Each domain consists of two four-strand "Greek key" beta-sheets. Although the domains are tightly anchored to one another by the hydrophobic surfaces of the two inner Greek key motifs, the N-arm, the interdomain linker and several turn regions show unexpected flexibility and disorder in solution. This may contribute entropic stabilization to the protein in solution, but may also indicate nucleation sites for unfolding or other structural transitions. The method used for solving the gammaS structure relies on the recently introduced molecular fragment replacement method, which capitalizes on the large database of protein structures previously solved by X-ray crystallography and NMR.


'''NMR structure of murine gamma-S crystallin'''
Solution structure of (gamma)S-crystallin by molecular fragment replacement NMR.,Wu Z, Delaglio F, Wyatt K, Wistow G, Bax A Protein Sci. 2005 Dec;14(12):3101-14. Epub 2005 Oct 31. PMID:16260758<ref>PMID:16260758</ref>


From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 1zwm" style="background-color:#fffaf0;"></div>


==Overview==
==See Also==
The solution structure of murine gammaS-crystallin (gammaS) has been determined by multidimensional triple resonance NMR spectroscopy, using restraints derived from two sets of dipolar couplings, recorded in different alignment media, and supplemented by a small number of NOE distance restraints. gammaS consists of two topologically similar domains, arranged with an approximate twofold symmetry, and each domain shows close structural homology to closely related (approximately 50% sequence identity) domains found in other members of the gamma-crystallin family. Each domain consists of two four-strand "Greek key" beta-sheets. Although the domains are tightly anchored to one another by the hydrophobic surfaces of the two inner Greek key motifs, the N-arm, the interdomain linker and several turn regions show unexpected flexibility and disorder in solution. This may contribute entropic stabilization to the protein in solution, but may also indicate nucleation sites for unfolding or other structural transitions. The method used for solving the gammaS structure relies on the recently introduced molecular fragment replacement method, which capitalizes on the large database of protein structures previously solved by X-ray crystallography and NMR.
*[[Crystallin 3D structures|Crystallin 3D structures]]
 
== References ==
==About this Structure==
<references/>
1ZWM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZWM OCA].
__TOC__
 
</StructureSection>
==Reference==
[[Category: Large Structures]]
Solution structure of (gamma)S-crystallin by molecular fragment replacement NMR., Wu Z, Delaglio F, Wyatt K, Wistow G, Bax A, Protein Sci. 2005 Dec;14(12):3101-14. Epub 2005 Oct 31. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16260758 16260758]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
[[Category: Single protein]]
[[Category: Bax A]]
[[Category: Bax, A.]]
[[Category: Delaglio F]]
[[Category: Delaglio, F.]]
[[Category: Wistow G]]
[[Category: Wistow, G.]]
[[Category: Wu Z]]
[[Category: Wu, Z.]]
[[Category: Wyatt K]]
[[Category: Wyatt, K.]]
[[Category: alignment]]
[[Category: deuteration]]
[[Category: liquid crystal]]
[[Category: mfr]]
[[Category: molecular fragment replacement]]
[[Category: pf1]]
[[Category: rdc]]
[[Category: relaxation]]
[[Category: residual dipolar coupling]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:42:36 2008''

Latest revision as of 11:13, 15 May 2024

NMR structure of murine gamma-S crystallinNMR structure of murine gamma-S crystallin

Structural highlights

1zwm is a 1 chain structure with sequence from Mus musculus. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solution NMR
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

CRYGS_MOUSE Crystallins are the dominant structural components of the vertebrate eye lens.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

The solution structure of murine gammaS-crystallin (gammaS) has been determined by multidimensional triple resonance NMR spectroscopy, using restraints derived from two sets of dipolar couplings, recorded in different alignment media, and supplemented by a small number of NOE distance restraints. gammaS consists of two topologically similar domains, arranged with an approximate twofold symmetry, and each domain shows close structural homology to closely related (approximately 50% sequence identity) domains found in other members of the gamma-crystallin family. Each domain consists of two four-strand "Greek key" beta-sheets. Although the domains are tightly anchored to one another by the hydrophobic surfaces of the two inner Greek key motifs, the N-arm, the interdomain linker and several turn regions show unexpected flexibility and disorder in solution. This may contribute entropic stabilization to the protein in solution, but may also indicate nucleation sites for unfolding or other structural transitions. The method used for solving the gammaS structure relies on the recently introduced molecular fragment replacement method, which capitalizes on the large database of protein structures previously solved by X-ray crystallography and NMR.

Solution structure of (gamma)S-crystallin by molecular fragment replacement NMR.,Wu Z, Delaglio F, Wyatt K, Wistow G, Bax A Protein Sci. 2005 Dec;14(12):3101-14. Epub 2005 Oct 31. PMID:16260758[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Wu Z, Delaglio F, Wyatt K, Wistow G, Bax A. Solution structure of (gamma)S-crystallin by molecular fragment replacement NMR. Protein Sci. 2005 Dec;14(12):3101-14. Epub 2005 Oct 31. PMID:16260758 doi:10.1110/ps.051635205
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