1zgh: Difference between revisions

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[[Image:1zgh.png|left|200px]]


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==Methionyl-tRNA formyltransferase from Clostridium thermocellum==
The line below this paragraph, containing "STRUCTURE_1zgh", creates the "Structure Box" on the page.
<StructureSection load='1zgh' size='340' side='right'caption='[[1zgh]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1zgh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus_ATCC_27405 Acetivibrio thermocellus ATCC 27405]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1xg9 1xg9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZGH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZGH FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
{{STRUCTURE_1zgh|  PDB=1zgh  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zgh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zgh OCA], [https://pdbe.org/1zgh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zgh RCSB], [https://www.ebi.ac.uk/pdbsum/1zgh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zgh ProSAT], [https://www.topsan.org/Proteins/SECSG/1zgh TOPSAN]</span></td></tr>
 
</table>
===Methionyl-tRNA formyltransferase from Clostridium thermocellum===
== Function ==
 
[https://www.uniprot.org/uniprot/A3DHJ7_ACET2 A3DHJ7_ACET2]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1ZGH is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_thermocellum_atcc_27405 Clostridium thermocellum atcc 27405]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1xg9 1xg9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZGH OCA].  
Check<jmol>
[[Category: Clostridium thermocellum atcc 27405]]
  <jmolCheckbox>
[[Category: Chang, J.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zg/1zgh_consurf.spt"</scriptWhenChecked>
[[Category: Chang, S.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Chen, L.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Habel, J.]]
  </jmolCheckbox>
[[Category: III, W B.Arendall.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zgh ConSurf].
[[Category: Kataeva, I.]]
<div style="clear:both"></div>
[[Category: Lee, D.]]
__TOC__
[[Category: Lin, D.]]
</StructureSection>
[[Category: Liu, Z.]]
[[Category: Acetivibrio thermocellus ATCC 27405]]
[[Category: Richardson, D C.]]
[[Category: Large Structures]]
[[Category: Richardson, J S.]]
[[Category: Arendall III WB]]
[[Category: Rose, J P.]]
[[Category: Chang J]]
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
[[Category: Chang S]]
[[Category: Tempel, W.]]
[[Category: Chen L]]
[[Category: Wang, B.]]
[[Category: Habel J]]
[[Category: Xu, H.]]
[[Category: Kataeva I]]
[[Category: Yang, H.]]
[[Category: Lee D]]
[[Category: Zhao, M.]]
[[Category: Lin D]]
[[Category: Zhou, W.]]
[[Category: Liu Z]]
[[Category: Clostridium thermocellum]]
[[Category: Richardson DC]]
[[Category: Methionyl-trna formyltransferase]]
[[Category: Richardson JS]]
[[Category: Protein structure initiative]]
[[Category: Rose JP]]
[[Category: Psi]]
[[Category: Tempel W]]
[[Category: Secsg]]
[[Category: Wang B]]
[[Category: Southeast collaboratory for structural genomic]]
[[Category: Xu H]]
 
[[Category: Yang H]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 13:55:19 2008''
[[Category: Zhao M]]
[[Category: Zhou W]]

Latest revision as of 11:11, 15 May 2024

Methionyl-tRNA formyltransferase from Clostridium thermocellumMethionyl-tRNA formyltransferase from Clostridium thermocellum

Structural highlights

1zgh is a 1 chain structure with sequence from Acetivibrio thermocellus ATCC 27405. This structure supersedes the now removed PDB entry 1xg9. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.05Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A3DHJ7_ACET2

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1zgh, resolution 2.05Å

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OCA
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