1ysx: Difference between revisions
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==Solution structure of domain 3 from human serum albumin complexed to an anti-apoptotic ligand directed against Bcl-xL and Bcl-2== | ==Solution structure of domain 3 from human serum albumin complexed to an anti-apoptotic ligand directed against Bcl-xL and Bcl-2== | ||
<StructureSection load='1ysx' size='340' side='right' caption='[[1ysx | <StructureSection load='1ysx' size='340' side='right'caption='[[1ysx]]' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1ysx]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[1ysx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YSX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YSX FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=4EB:4-({2-[(2,4-DIMETHYLPHENYL)SULFANYL]ETHYL}AMINO)-N-[(4-FLUORO-1,1-BIPHENYL-4-YL)CARBONYL]-3-NITROBENZENESULFONAMIDE'>4EB</scene> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4EB:4-({2-[(2,4-DIMETHYLPHENYL)SULFANYL]ETHYL}AMINO)-N-[(4-FLUORO-1,1-BIPHENYL-4-YL)CARBONYL]-3-NITROBENZENESULFONAMIDE'>4EB</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ysx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ysx OCA], [https://pdbe.org/1ysx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ysx RCSB], [https://www.ebi.ac.uk/pdbsum/1ysx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ysx ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Disease == | == Disease == | ||
[ | [https://www.uniprot.org/uniprot/ALBU_HUMAN ALBU_HUMAN] Defects in ALB are a cause of familial dysalbuminemic hyperthyroxinemia (FDH) [MIM:[https://omim.org/entry/103600 103600]. FDH is a form of euthyroid hyperthyroxinemia that is due to increased affinity of ALB for T(4). It is the most common cause of inherited euthyroid hyperthyroxinemia in Caucasian population.<ref>PMID:8048949</ref> <ref>PMID:7852505</ref> <ref>PMID:9329347</ref> <ref>PMID:9589637</ref> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/ALBU_HUMAN ALBU_HUMAN] Serum albumin, the main protein of plasma, has a good binding capacity for water, Ca(2+), Na(+), K(+), fatty acids, hormones, bilirubin and drugs. Its main function is the regulation of the colloidal osmotic pressure of blood. Major zinc transporter in plasma, typically binds about 80% of all plasma zinc.<ref>PMID:19021548</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ys/1ysx_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ys/1ysx_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ysx ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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==See Also== | ==See Also== | ||
*[[Albumin|Albumin]] | *[[Albumin 3D structures|Albumin 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Homo sapiens]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Armstrong RC]] | ||
[[Category: | [[Category: Augeri DJ]] | ||
[[Category: | [[Category: Belli BA]] | ||
[[Category: | [[Category: Bruncko M]] | ||
[[Category: Deckwerth | [[Category: Deckwerth TL]] | ||
[[Category: Dinges | [[Category: Dinges J]] | ||
[[Category: Elmore | [[Category: Elmore SW]] | ||
[[Category: Fesik | [[Category: Fesik SW]] | ||
[[Category: Hajduk | [[Category: Hajduk PJ]] | ||
[[Category: Joseph | [[Category: Joseph MK]] | ||
[[Category: Kitada | [[Category: Kitada S]] | ||
[[Category: Korsmeyer | [[Category: Korsmeyer SJ]] | ||
[[Category: Kunzer | [[Category: Kunzer AR]] | ||
[[Category: Letai | [[Category: Letai A]] | ||
[[Category: Li | [[Category: Li C]] | ||
[[Category: Mitten | [[Category: Mitten MJ]] | ||
[[Category: Nettesheim | [[Category: Nettesheim DG]] | ||
[[Category: Ng | [[Category: Ng S]] | ||
[[Category: Nimmer | [[Category: Nimmer PM]] | ||
[[Category: Oleksijew | [[Category: O'Connor JM]] | ||
[[Category: Oltersdorf | [[Category: Oleksijew A]] | ||
[[Category: Petros | [[Category: Oltersdorf T]] | ||
[[Category: Reed | [[Category: Petros AM]] | ||
[[Category: Rosenberg | [[Category: Reed JC]] | ||
[[Category: Shen | [[Category: Rosenberg SH]] | ||
[[Category: Shoemaker | [[Category: Shen W]] | ||
[[Category: Tahir | [[Category: Shoemaker AR]] | ||
[[Category: Thompson | [[Category: Tahir SK]] | ||
[[Category: Tomaselli | [[Category: Thompson CB]] | ||
[[Category: Wang | [[Category: Tomaselli KJ]] | ||
[[Category: Wendt | [[Category: Wang B]] | ||
[[Category: Zhang | [[Category: Wendt MD]] | ||
[[Category: Zhang H]] | |||