1x62: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:1x62.gif|left|200px]]<br />
-<applet load="1x62" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="1x62" />
-'''Solution structure of the LIM domain of carboxyl terminal LIM domain protein 1'''<br />
-==About this Structure==
+==Solution structure of the LIM domain of carboxyl terminal LIM domain protein 1==
-X62 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with ZN as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1X62 OCA].
+<StructureSection load='1x62' size='340' side='right'caption='[[1x62]]' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1x62]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X62 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X62 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x62 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x62 OCA], [https://pdbe.org/1x62 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x62 RCSB], [https://www.ebi.ac.uk/pdbsum/1x62 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x62 ProSAT], [https://www.topsan.org/Proteins/RSGI/1x62 TOPSAN]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/PDLI1_HUMAN PDLI1_HUMAN] Cytoskeletal protein that may act as an adapter that brings other proteins (like kinases) to the cytoskeleton.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x6/1x62_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x62 ConSurf].
+<div style="clear:both"></div>
+==See Also==
+*[[PDZ and LIM domain protein|PDZ and LIM domain protein]]
+__TOC__
+</StructureSection>
 [[Category: Homo sapiens]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: Hayashi, F.]]
+[[Category: Hayashi F]]
-[[Category: Nagashima, T.]]
+[[Category: Nagashima T]]
-[[Category: Qin, X.R.]]
+[[Category: Qin XR]]
-[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
+[[Category: Yokoyama S]]
-[[Category: Yokoyama, S.]]
-[[Category: ZN]]
-[[Category: c-terminal lim domain protein 1]]
-[[Category: contractile protein]]
-[[Category: lim domain]]
-[[Category: lim domain protein clp-36]]
-[[Category: national project on protein structural and functional analyses]]
-[[Category: nppsfa]]
-[[Category: pdz and lim domain protein 1]]
-[[Category: riken structural genomics/proteomics initiative]]
-[[Category: rsgi]]
-[[Category: structural genomics]]
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 12 20:00:41 2007''