1wy7: Difference between revisions

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[[Image:1wy7.gif|left|200px]]


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==crystal structure of a putative RNA methyltransferase PH1948 from Pyrococcus horikoshii==
The line below this paragraph, containing "STRUCTURE_1wy7", creates the "Structure Box" on the page.
<StructureSection load='1wy7' size='340' side='right'caption='[[1wy7]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1wy7]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WY7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WY7 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
{{STRUCTURE_1wy7|  PDB=1wy7  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wy7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wy7 OCA], [https://pdbe.org/1wy7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wy7 RCSB], [https://www.ebi.ac.uk/pdbsum/1wy7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wy7 ProSAT]</span></td></tr>
 
</table>
'''crystal structure of a putative RNA methyltransferase PH1948 from Pyrococcus horikoshii'''
== Function ==
 
[https://www.uniprot.org/uniprot/O59611_PYRHO O59611_PYRHO]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1WY7 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WY7 OCA].  
Check<jmol>
 
  <jmolCheckbox>
==Reference==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wy/1wy7_consurf.spt"</scriptWhenChecked>
Crystal structure of the putative RNA methyltransferase PH1948 from Pyrococcus horikoshii, in complex with the copurified S-adenosyl-L-homocysteine., Gao YG, Yao M, Yong Z, Tanaka I, Proteins. 2005 Dec 1;61(4):1141-5. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16245322 16245322]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Pyrococcus horikoshii]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
[[Category: Gao, Y G.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wy7 ConSurf].
[[Category: Tanaka, I.]]
<div style="clear:both"></div>
[[Category: Yao, M.]]
__TOC__
[[Category: Methyltransferase fold]]
</StructureSection>
[[Category: Seven-stranded beta sheet]]
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Pyrococcus horikoshii OT3]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 14:17:57 2008''
[[Category: Gao YG]]
[[Category: Tanaka I]]
[[Category: Yao M]]

Latest revision as of 16:53, 9 May 2024

crystal structure of a putative RNA methyltransferase PH1948 from Pyrococcus horikoshiicrystal structure of a putative RNA methyltransferase PH1948 from Pyrococcus horikoshii

Structural highlights

1wy7 is a 4 chain structure with sequence from Pyrococcus horikoshii OT3. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

O59611_PYRHO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1wy7, resolution 2.20Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

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