1wy7: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1wy7.gif|left|200px]]<br /><applet load="1wy7" size="350" color="white" frame="true" align="right" spinBox="true"
caption="1wy7, resolution 2.2&Aring;" />
'''crystal structure of a putative RNA methyltransferase PH1948 from Pyrococcus horikoshii'''<br />


==About this Structure==
==crystal structure of a putative RNA methyltransferase PH1948 from Pyrococcus horikoshii==
1WY7 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii] with <scene name='pdbligand=SAH:'>SAH</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WY7 OCA].  
<StructureSection load='1wy7' size='340' side='right'caption='[[1wy7]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
 
== Structural highlights ==
==Reference==
<table><tr><td colspan='2'>[[1wy7]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WY7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WY7 FirstGlance]. <br>
Crystal structure of the putative RNA methyltransferase PH1948 from Pyrococcus horikoshii, in complex with the copurified S-adenosyl-L-homocysteine., Gao YG, Yao M, Yong Z, Tanaka I, Proteins. 2005 Dec 1;61(4):1141-5. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16245322 16245322]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
[[Category: Pyrococcus horikoshii]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
[[Category: Single protein]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wy7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wy7 OCA], [https://pdbe.org/1wy7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wy7 RCSB], [https://www.ebi.ac.uk/pdbsum/1wy7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wy7 ProSAT]</span></td></tr>
[[Category: Gao, Y G.]]
</table>
[[Category: Tanaka, I.]]
== Function ==
[[Category: Yao, M.]]
[https://www.uniprot.org/uniprot/O59611_PYRHO O59611_PYRHO]  
[[Category: SAH]]
== Evolutionary Conservation ==
[[Category: methyltransferase fold]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: seven-stranded beta sheet]]
Check<jmol>
[[Category: structural genomics]]
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wy/1wy7_consurf.spt"</scriptWhenChecked>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:49:17 2008''
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wy7 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Gao YG]]
[[Category: Tanaka I]]
[[Category: Yao M]]

Latest revision as of 16:53, 9 May 2024

crystal structure of a putative RNA methyltransferase PH1948 from Pyrococcus horikoshiicrystal structure of a putative RNA methyltransferase PH1948 from Pyrococcus horikoshii

Structural highlights

1wy7 is a 4 chain structure with sequence from Pyrococcus horikoshii OT3. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

O59611_PYRHO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1wy7, resolution 2.20Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=1wy7&oldid=4149751"