1wot: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-{{Seed}}
-[[Image:1wot.png|left|200px]]
-<!--
+==Structure of putative minimal nucleotidyltransferase==
-The line below this paragraph, containing "STRUCTURE_1wot", creates the "Structure Box" on the page.
+<StructureSection load='1wot' size='340' side='right'caption='[[1wot]]' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1wot]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1j0l 1j0l]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WOT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WOT FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wot FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wot OCA], [https://pdbe.org/1wot PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wot RCSB], [https://www.ebi.ac.uk/pdbsum/1wot PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wot ProSAT], [https://www.topsan.org/Proteins/RSGI/1wot TOPSAN]</span></td></tr>
-{{STRUCTURE_1wot|  PDB=1wot  |  SCENE=  }}
+</table>
+== Function ==
-===Structure of putative minimal nucleotidyltransferase===
+[https://www.uniprot.org/uniprot/P83814_THETH P83814_THETH]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-==About this Structure==
+Check<jmol>
-This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1j0l 1j0l]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WOT OCA].
+  <jmolCheckbox>
-[[Category: Hatanaka, H.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wo/1wot_consurf.spt"</scriptWhenChecked>
-[[Category: Hondoh, T.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Inoue, Y.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Kuramitsu, S.]]
+  </jmolCheckbox>
-[[Category: Kuroda, Y.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wot ConSurf].
-[[Category: Okumura, A.]]
+<div style="clear:both"></div>
-[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+__TOC__
-[[Category: Shibata, T.]]
+</StructureSection>
-[[Category: Suzuki, S.]]
+[[Category: Large Structures]]
-[[Category: Yokoyama, S.]]
+[[Category: Thermus thermophilus]]
-[[Category: Alpha and beta]]
+[[Category: Hatanaka H]]
-[[Category: Riken structural genomics/proteomics initiative]]
+[[Category: Hondoh T]]
-[[Category: Rsgi]]
+[[Category: Inoue Y]]
-[[Category: Structural genomic]]
+[[Category: Kuramitsu S]]
+[[Category: Kuroda Y]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 15:12:08 2008''
+[[Category: Okumura A]]
+[[Category: Shibata T]]
+[[Category: Suzuki S]]
+[[Category: Yokoyama S]]