1wot: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(11 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1wot.jpg|left|200px]]


<!--
==Structure of putative minimal nucleotidyltransferase==
The line below this paragraph, containing "STRUCTURE_1wot", creates the "Structure Box" on the page.
<StructureSection load='1wot' size='340' side='right'caption='[[1wot]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1wot]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1j0l 1j0l]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WOT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WOT FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wot FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wot OCA], [https://pdbe.org/1wot PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wot RCSB], [https://www.ebi.ac.uk/pdbsum/1wot PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wot ProSAT], [https://www.topsan.org/Proteins/RSGI/1wot TOPSAN]</span></td></tr>
{{STRUCTURE_1wot|  PDB=1wot |  SCENE= }}
</table>
 
== Function ==
'''Structure of putative minimal nucleotidyltransferase'''
[https://www.uniprot.org/uniprot/P83814_THETH P83814_THETH]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1j0l 1j0l]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WOT OCA].  
  <jmolCheckbox>
[[Category: Hatanaka, H.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wo/1wot_consurf.spt"</scriptWhenChecked>
[[Category: Hondoh, T.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Inoue, Y.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Kuramitsu, S.]]
  </jmolCheckbox>
[[Category: Kuroda, Y.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wot ConSurf].
[[Category: Okumura, A.]]
<div style="clear:both"></div>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
__TOC__
[[Category: Shibata, T.]]
</StructureSection>
[[Category: Suzuki, S.]]
[[Category: Large Structures]]
[[Category: Yokoyama, S.]]
[[Category: Thermus thermophilus]]
[[Category: Alpha and beta]]
[[Category: Hatanaka H]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Hondoh T]]
[[Category: Rsgi]]
[[Category: Inoue Y]]
[[Category: Structural genomic]]
[[Category: Kuramitsu S]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 13:57:29 2008''
[[Category: Kuroda Y]]
[[Category: Okumura A]]
[[Category: Shibata T]]
[[Category: Suzuki S]]
[[Category: Yokoyama S]]

Latest revision as of 16:46, 9 May 2024

Structure of putative minimal nucleotidyltransferaseStructure of putative minimal nucleotidyltransferase

Structural highlights

1wot is a 1 chain structure with sequence from Thermus thermophilus. This structure supersedes the now removed PDB entry 1j0l. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solution NMR
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

P83814_THETH

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=1wot&oldid=4149572"