4b0r: Difference between revisions
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==Structure of the Deamidase-Depupylase Dop of the Prokaryotic Ubiquitin-like Modification Pathway== | ==Structure of the Deamidase-Depupylase Dop of the Prokaryotic Ubiquitin-like Modification Pathway== | ||
<StructureSection load='4b0r' size='340' side='right' caption='[[4b0r]], [[Resolution|resolution]] 2.60Å' scene=''> | <StructureSection load='4b0r' size='340' side='right'caption='[[4b0r]], [[Resolution|resolution]] 2.60Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4b0r]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[4b0r]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acidothermus_cellulolyticus_11B Acidothermus cellulolyticus 11B]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4B0R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4B0R FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4b0r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4b0r OCA], [https://pdbe.org/4b0r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4b0r RCSB], [https://www.ebi.ac.uk/pdbsum/4b0r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4b0r ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/DOP_ACIC1 DOP_ACIC1] Displays depupylase (DPUP) activity, removing conjugated Pup from target proteins; is thus involved in the recycling of Pup and may function similarly to deubiquitinases (DUBs) in eukaryotes to prevent or promote proteasomal degradation of certain proteins. Is also able to catalyze the deamidation of the C-terminal glutamine to glutamate in a variant of the prokaryotic ubiquitin-like protein Pup; however, since Pup from A.cellulolyticus possesses a C-terminal glutamate, this deamidase activity may be of no significance in vivo.<ref>PMID:22910360</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
<div class="pdbe-citations 4b0r" style="background-color:#fffaf0;"></div> | |||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Acidothermus cellulolyticus]] | [[Category: Acidothermus cellulolyticus 11B]] | ||
[[Category: Allain | [[Category: Large Structures]] | ||
[[Category: Ban | [[Category: Allain FH-T]] | ||
[[Category: Barandun | [[Category: Ban N]] | ||
[[Category: Damberger | [[Category: Barandun J]] | ||
[[Category: Guth | [[Category: Damberger FF]] | ||
[[Category: Ozcelik | [[Category: Guth E]] | ||
[[Category: Schmitz | [[Category: Ozcelik D]] | ||
[[Category: Sutter | [[Category: Schmitz N]] | ||
[[Category: Weber-Ban | [[Category: Sutter M]] | ||
[[Category: Weber-Ban E]] | |||