2v8u: Difference between revisions

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New page: left|200px<br /> <applet load="2v8u" size="450" color="white" frame="true" align="right" spinBox="true" caption="2v8u, resolution 1.05Å" /> '''ATOMIC RESOLUTION S...
 
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[[Image:2v8u.gif|left|200px]]<br />
<applet load="2v8u" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2v8u, resolution 1.05&Aring;" />
'''ATOMIC RESOLUTION STRUCTURE OF MN CATALASE FROM THERMUS THERMOPHILUS'''<br />


==About this Structure==
==Atomic resolution structure of Mn catalase from Thermus Thermophilus==
2V8U is a [[http://en.wikipedia.org/wiki/Single_protein Single protein]] structure of sequence from [[http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]] with MN, LI, SO4 and O as [[http://en.wikipedia.org/wiki/ligands ligands]]. Active as [[http://en.wikipedia.org/wiki/ ]], with EC number [[http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.6 1.11.1.6]]. Full crystallographic information is available from [[http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2V8U OCA]].
<StructureSection load='2v8u' size='340' side='right'caption='[[2v8u]], [[Resolution|resolution]] 1.05&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Thermus thermophilus]]
<table><tr><td colspan='2'>[[2v8u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB27 Thermus thermophilus HB27]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V8U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V8U FirstGlance]. <br>
[[Category: Antonyuk, S.V.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.05&#8491;</td></tr>
[[Category: Artymiuk, P.J.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LI:LITHIUM+ION'>LI</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=O:OXYGEN+ATOM'>O</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[Category: Barynin, V.V.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v8u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v8u OCA], [https://pdbe.org/2v8u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v8u RCSB], [https://www.ebi.ac.uk/pdbsum/2v8u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v8u ProSAT]</span></td></tr>
[[Category: Harrison, P.M.]]
</table>
[[Category: Lamsin, V.S.]]
== Function ==
[[Category: Melik-Adamyan, W.R.]]
[https://www.uniprot.org/uniprot/Q84DB4_THETH Q84DB4_THETH]  
[[Category: Popov, A.N.]]
== Evolutionary Conservation ==
[[Category: Vaguine, A.A.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: LI]]
Check<jmol>
[[Category: MN]]
  <jmolCheckbox>
[[Category: O]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v8/2v8u_consurf.spt"</scriptWhenChecked>
[[Category: SO4]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: manganese catalase]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: oxidoreductase]]
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2v8u ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Oct 29 23:05:50 2007''
==See Also==
*[[Catalase 3D structures|Catalase 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus HB27]]
[[Category: Antonyuk SV]]
[[Category: Artymiuk PJ]]
[[Category: Barynin VV]]
[[Category: Harrison PM]]
[[Category: Lamsin VS]]
[[Category: Melik-Adamyan WR]]
[[Category: Popov AN]]
[[Category: Vaguine AA]]

Latest revision as of 12:56, 9 May 2024

Atomic resolution structure of Mn catalase from Thermus ThermophilusAtomic resolution structure of Mn catalase from Thermus Thermophilus

Structural highlights

2v8u is a 2 chain structure with sequence from Thermus thermophilus HB27. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.05Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q84DB4_THETH

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2v8u, resolution 1.05Å

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