2kbn: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2kbn.jpg|left|200px]]


<!--
==Solution NMR structure of the OB domain (residues 67-166) of MM0293 from Methanosarcina mazei. Northeast Structural Genomics Consortium target MaR214a.==
The line below this paragraph, containing "STRUCTURE_2kbn", creates the "Structure Box" on the page.
<StructureSection load='2kbn' size='340' side='right'caption='[[2kbn]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2kbn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanosarcina_mazei Methanosarcina mazei]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KBN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KBN FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kbn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kbn OCA], [https://pdbe.org/2kbn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kbn RCSB], [https://www.ebi.ac.uk/pdbsum/2kbn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kbn ProSAT], [https://www.topsan.org/Proteins/NESGC/2kbn TOPSAN]</span></td></tr>
{{STRUCTURE_2kbn|  PDB=2kbn  |  SCENE=  }}
</table>
 
== Function ==
===Solution NMR structure of the OB domain (residues 67-166) of MM0293 from Methanosarcina mazei. Northeast Structural Genomics Consortium target MaR214a.===
[https://www.uniprot.org/uniprot/Q8Q045_METMA Q8Q045_METMA]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2KBN is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Methanosarcina_mazei Methanosarcina mazei]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KBN OCA].  
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kb/2kbn_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kbn ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Methanosarcina mazei]]
[[Category: Methanosarcina mazei]]
[[Category: Acton, T B.]]
[[Category: Acton TB]]
[[Category: Ciccosanti, C.]]
[[Category: Ciccosanti C]]
[[Category: Ding, K.]]
[[Category: Ding K]]
[[Category: Everett, J K.]]
[[Category: Everett JK]]
[[Category: Jiang, M.]]
[[Category: Jiang M]]
[[Category: Kennedy, M A.]]
[[Category: Kennedy MA]]
[[Category: Lui, J.]]
[[Category: Lui J]]
[[Category: Magliqui, M.]]
[[Category: Magliqui M]]
[[Category: Montelione, G T.]]
[[Category: Montelione GT]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Ramelot TA]]
[[Category: Ramelot, T A.]]
[[Category: Rost B]]
[[Category: Rost, B.]]
[[Category: Swapna G]]
[[Category: Swapna, G.]]
[[Category: Xiao R]]
[[Category: Xiao, R.]]
[[Category: Beta barrel]]
[[Category: Nesg]]
[[Category: Northeast structural genomics consortium]]
[[Category: Nucleic acid binding protein]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul  8 12:34:57 2009''

Latest revision as of 12:46, 9 May 2024

Solution NMR structure of the OB domain (residues 67-166) of MM0293 from Methanosarcina mazei. Northeast Structural Genomics Consortium target MaR214a.Solution NMR structure of the OB domain (residues 67-166) of MM0293 from Methanosarcina mazei. Northeast Structural Genomics Consortium target MaR214a.

Structural highlights

2kbn is a 1 chain structure with sequence from Methanosarcina mazei. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solution NMR
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q8Q045_METMA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2kbn&oldid=4144851"