2k5j: Difference between revisions

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{{Seed}}
[[Image:2k5j.png|left|200px]]


<!--
==Solution structure of protein yiiF from Shigella flexneri serotype 5b (strain 8401) . Northeast Structural Genomics Consortium target sft1==
The line below this paragraph, containing "STRUCTURE_2k5j", creates the "Structure Box" on the page.
<StructureSection load='2k5j' size='340' side='right'caption='[[2k5j]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2k5j]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri_5_str._8401 Shigella flexneri 5 str. 8401]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K5J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K5J FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k5j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k5j OCA], [https://pdbe.org/2k5j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k5j RCSB], [https://www.ebi.ac.uk/pdbsum/2k5j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k5j ProSAT], [https://www.topsan.org/Proteins/NESGC/2k5j TOPSAN]</span></td></tr>
{{STRUCTURE_2k5j|  PDB=2k5j  |  SCENE=  }}
</table>
 
== Function ==
===Solution structure of protein yiiF from Shigella flexneri serotype 5b (strain 8401) . Northeast Structural Genomics Consortium target sft1===
[https://www.uniprot.org/uniprot/Q0SZ80_SHIF8 Q0SZ80_SHIF8]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2K5J is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Shigella_flexneri_5_str._8401 Shigella flexneri 5 str. 8401]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K5J OCA].  
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k5/2k5j_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k5j ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Shigella flexneri 5 str. 8401]]
[[Category: Shigella flexneri 5 str. 8401]]
[[Category: Arrowsmith, C.]]
[[Category: Arrowsmith C]]
[[Category: Bansal, S.]]
[[Category: Bansal S]]
[[Category: Montelione, G T.]]
[[Category: Montelione GT]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Prestegard J]]
[[Category: Prestegard, J.]]
[[Category: Semesi A]]
[[Category: Semesi, A.]]
[[Category: Singarapu K]]
[[Category: Singarapu, K.]]
[[Category: Szyperski T]]
[[Category: Szyperski, T.]]
[[Category: Wu Y]]
[[Category: Wu, Y.]]
[[Category: Yee A]]
[[Category: Yee, A.]]
[[Category: Nesg]]
[[Category: Nmr structure]]
[[Category: Northeast structural genomics consortium]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 15:12:38 2008''

Latest revision as of 12:45, 9 May 2024

Solution structure of protein yiiF from Shigella flexneri serotype 5b (strain 8401) . Northeast Structural Genomics Consortium target sft1Solution structure of protein yiiF from Shigella flexneri serotype 5b (strain 8401) . Northeast Structural Genomics Consortium target sft1

Structural highlights

2k5j is a 2 chain structure with sequence from Shigella flexneri 5 str. 8401. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solution NMR
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q0SZ80_SHIF8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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