2k4j: Difference between revisions

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{{Seed}}
[[Image:2k4j.jpg|left|200px]]


<!--
==ArsR DNA Binding Domain==
The line below this paragraph, containing "STRUCTURE_2k4j", creates the "Structure Box" on the page.
<StructureSection load='2k4j' size='340' side='right'caption='[[2k4j]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2k4j]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_J99 Helicobacter pylori J99]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K4J FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k4j OCA], [https://pdbe.org/2k4j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k4j RCSB], [https://www.ebi.ac.uk/pdbsum/2k4j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k4j ProSAT]</span></td></tr>
{{STRUCTURE_2k4j|  PDB=2k4j  |  SCENE=  }}
</table>
 
== Function ==
===ArsR DNA Binding Domain===
[https://www.uniprot.org/uniprot/Q9ZMR6_HELPJ Q9ZMR6_HELPJ]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2K4J is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori_j99 Helicobacter pylori j99]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA].  
  <jmolCheckbox>
[[Category: Helicobacter pylori j99]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k4/2k4j_consurf.spt"</scriptWhenChecked>
[[Category: Cover, T L.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Gupta, S S.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Krezel, A M.]]
  </jmolCheckbox>
[[Category: Acid resistance]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k4j ConSurf].
[[Category: Dna-binding]]
<div style="clear:both"></div>
[[Category: Helicobacter pylori]]
__TOC__
[[Category: Phosphoprotein]]
</StructureSection>
[[Category: Response regulator]]
[[Category: Helicobacter pylori J99]]
[[Category: Transcription]]
[[Category: Large Structures]]
[[Category: Transcription regulation]]
[[Category: Cover TL]]
 
[[Category: Gupta SS]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 31 10:06:51 2008''
[[Category: Krezel AM]]

Latest revision as of 12:44, 9 May 2024

ArsR DNA Binding DomainArsR DNA Binding Domain

Structural highlights

2k4j is a 1 chain structure with sequence from Helicobacter pylori J99. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solution NMR
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q9ZMR6_HELPJ

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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