1w79: Difference between revisions

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==Crystal structure of the DD-transpeptidase-carboxypeptidase from Actinomadura R39==
==Crystal structure of the DD-transpeptidase-carboxypeptidase from Actinomadura R39==
<StructureSection load='1w79' size='340' side='right' caption='[[1w79]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='1w79' size='340' side='right'caption='[[1w79]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1w79]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W79 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1W79 FirstGlance]. <br>
<table><tr><td colspan='2'>[[1w79]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Actinomadura_sp._R39 Actinomadura sp. R39]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W79 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1W79 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1w8q|1w8q]], [[1w8y|1w8y]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serine-type_D-Ala-D-Ala_carboxypeptidase Serine-type D-Ala-D-Ala carboxypeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.4 3.4.16.4] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1w79 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1w79 OCA], [https://pdbe.org/1w79 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1w79 RCSB], [https://www.ebi.ac.uk/pdbsum/1w79 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1w79 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1w79 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1w79 OCA], [http://pdbe.org/1w79 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1w79 RCSB], [http://www.ebi.ac.uk/pdbsum/1w79 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1w79 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/DAC_ACTSP DAC_ACTSP]] Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors.  
[https://www.uniprot.org/uniprot/DAC_ACTSP DAC_ACTSP] Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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==See Also==
==See Also==
*[[Penicillin-binding protein|Penicillin-binding protein]]
*[[Carboxypeptidase 3D structures|Carboxypeptidase 3D structures]]
*[[Penicillin-binding protein 3D structures|Penicillin-binding protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]
[[Category: Actinomadura sp. R39]]
[[Category: Charlier, P]]
[[Category: Large Structures]]
[[Category: Duez, C]]
[[Category: Charlier P]]
[[Category: Frere, J M]]
[[Category: Duez C]]
[[Category: Herman, R]]
[[Category: Frere JM]]
[[Category: Petrella, S]]
[[Category: Herman R]]
[[Category: Sauvage, E]]
[[Category: Petrella S]]
[[Category: Actinomadura]]
[[Category: Sauvage E]]
[[Category: Antibiotic resistance]]
[[Category: Hydrolase]]
[[Category: Penicillin-binding]]
[[Category: Peptidoglycan]]
[[Category: Transpeptidase]]

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