1w5t: Difference between revisions

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-==STRUCTURE OF THE AEROPYRUM PERNIX ORC2 PROTEIN (ADPNP-ADP COMPLEXES)==
-<StructureSection load='1w5t' size='340' side='right' caption='[[1w5t]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
+==Structure of the Aeropyrum Pernix ORC2 protein (ADPNP-ADP complexes)==
+<StructureSection load='1w5t' size='340' side='right'caption='[[1w5t]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1w5t]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Aerpx Aerpx]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W5T OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1W5T FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1w5t]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeropyrum_pernix Aeropyrum pernix]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W5T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1W5T FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1w5s|1w5s]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1w5t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1w5t OCA], [http://pdbe.org/1w5t PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1w5t RCSB], [http://www.ebi.ac.uk/pdbsum/1w5t PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1w5t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1w5t OCA], [https://pdbe.org/1w5t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1w5t RCSB], [https://www.ebi.ac.uk/pdbsum/1w5t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1w5t ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/CDC62_AERPE CDC62_AERPE]] Involved in regulation of DNA replication (By similarity). Binds DNA.[HAMAP-Rule:MF_01407]<ref>PMID:15465044</ref>
+[https://www.uniprot.org/uniprot/CDC62_AERPE CDC62_AERPE] Involved in regulation of DNA replication (By similarity). Binds DNA.[HAMAP-Rule:MF_01407]<ref>PMID:15465044</ref>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w5/1w5t_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w5/1w5t_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
@@ Line 32: / Line 33: @@
 __TOC__
 </StructureSection>
-[[Category: Aerpx]]
+[[Category: Aeropyrum pernix]]
-[[Category: Cook, N]]
+[[Category: Large Structures]]
-[[Category: Grainge, I]]
+[[Category: Cook N]]
-[[Category: Isupov, M N]]
+[[Category: Grainge I]]
-[[Category: Morales, R]]
+[[Category: Isupov MN]]
-[[Category: Singleton, M R]]
+[[Category: Morales R]]
-[[Category: Wigley, D B]]
+[[Category: Singleton MR]]
-[[Category: Aaa+ atpase]]
+[[Category: Wigley DB]]
-[[Category: Cdc6]]
-[[Category: Dna binding protein]]
-[[Category: Dna replication initiation]]
-[[Category: Orc]]