1sum: Difference between revisions

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[[Image:1sum.png|left|200px]]


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==Crystal structure of a hypothetical protein at 2.0 A resolution==
The line below this paragraph, containing "STRUCTURE_1sum", creates the "Structure Box" on the page.
<StructureSection load='1sum' size='340' side='right'caption='[[1sum]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1sum]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SUM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SUM FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PO3:PHOSPHITE+ION'>PO3</scene></td></tr>
{{STRUCTURE_1sum|  PDB=1sum  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sum FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sum OCA], [https://pdbe.org/1sum PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sum RCSB], [https://www.ebi.ac.uk/pdbsum/1sum PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sum ProSAT], [https://www.topsan.org/Proteins/BSGC/1sum TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of a hypothetical protein at 2.0 A resolution===
== Function ==
 
[https://www.uniprot.org/uniprot/PHOU2_THEMA PHOU2_THEMA] Plays a role in the regulation of phosphate uptake (By similarity).
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_15716271}}, adds the Publication Abstract to the page
Check<jmol>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/su/1sum_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_15716271}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1SUM is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SUM OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sum ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:15716271</ref><references group="xtra"/>
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
[[Category: Adams, P D.]]
[[Category: Adams PD]]
[[Category: BSGC, Berkeley Structural Genomics Center.]]
[[Category: Kim R]]
[[Category: Kim, R.]]
[[Category: Kim SH]]
[[Category: Kim, S H.]]
[[Category: Liu J]]
[[Category: Liu, J.]]
[[Category: Lou Y]]
[[Category: Lou, Y.]]
[[Category: Yokota H]]
[[Category: Yokota, H.]]
[[Category: Abc transport]]
[[Category: Berkeley structural genomics center]]
[[Category: Bsgc]]
[[Category: Phou]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Pst]]
[[Category: Structural genomic]]
[[Category: Structure funded by nih]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 13:07:37 2009''

Latest revision as of 11:35, 1 May 2024

Crystal structure of a hypothetical protein at 2.0 A resolutionCrystal structure of a hypothetical protein at 2.0 A resolution

Structural highlights

1sum is a 1 chain structure with sequence from Thermotoga maritima. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

PHOU2_THEMA Plays a role in the regulation of phosphate uptake (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1sum, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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