1sqr: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:1sqr.gif|left|200px]]<br /><applet load="1sqr" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="1sqr" />
-'''Solution Structure of the 50S Ribosomal Protein L35AE from Pyrococcus furiosus. Northeast Structural Genomics Consortium Target PfR48.'''<br />
-==About this Structure==
+==Solution Structure of the 50S Ribosomal Protein L35AE from Pyrococcus furiosus. Northeast Structural Genomics Consortium Target PfR48.==
-SQR is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1SQR OCA].
+<StructureSection load='1sqr' size='340' side='right'caption='[[1sqr]]' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1sqr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SQR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SQR FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sqr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sqr OCA], [https://pdbe.org/1sqr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sqr RCSB], [https://www.ebi.ac.uk/pdbsum/1sqr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sqr ProSAT], [https://www.topsan.org/Proteins/NESGC/1sqr TOPSAN]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/RL35A_PYRFU RL35A_PYRFU]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sq/1sqr_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sqr ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Pyrococcus furiosus]]
-[[Category: Single protein]]
+[[Category: Acton TB]]
-[[Category: Acton, T.B.]]
+[[Category: Aramini JM]]
-[[Category: Aramini, J.M.]]
+[[Category: Cort JR]]
-[[Category: Cort, J.R.]]
+[[Category: Huang YJ]]
-[[Category: Huang, Y.J.]]
+[[Category: Kennedy MA]]
-[[Category: Kennedy, M.A.]]
+[[Category: Liu J]]
-[[Category: Liu, J.]]
+[[Category: Ma LC]]
-[[Category: Ma, L.C.]]
+[[Category: Montelione GT]]
-[[Category: Montelione, G.T.]]
+[[Category: Rost B]]
-[[Category: NESG, Northeast.Structural.Genomics.Consortium.]]
+[[Category: Shastry R]]
-[[Category: Rost, B.]]
+[[Category: Snyder DA]]
-[[Category: Shastry, R.]]
+[[Category: Xiao R]]
-[[Category: Snyder, D.A.]]
-[[Category: Xiao, R.]]
-[[Category: autostructure]]
-[[Category: beta-barrel]]
-[[Category: nesg]]
-[[Category: nmr structure]]
-[[Category: northeast structural genomics consortium]]
-[[Category: pfr48]]
-[[Category: protein structure initiative]]
-[[Category: psi]]
-[[Category: ribosomal protein]]
-[[Category: structural genomics]]
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 02:34:46 2007''