1sq8: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1sq8.jpg|left|200px]]<br /><applet load="1sq8" size="350" color="white" frame="true" align="right" spinBox="true"
caption="1sq8" />
'''a variant 434 repressor DNA binding domain devoid of hydroxyl groups, NMR, 20 STRUCTURES'''<br />


==About this Structure==
==a variant 434 repressor DNA binding domain devoid of hydroxyl groups, NMR, 20 STRUCTURES==
1SQ8 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacteriophage_434 Bacteriophage 434]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SQ8 OCA].  
<StructureSection load='1sq8' size='340' side='right'caption='[[1sq8]]' scene=''>
 
== Structural highlights ==
==Reference==
<table><tr><td colspan='2'>[[1sq8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Phage_434 Phage 434]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SQ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SQ8 FirstGlance]. <br>
NMR structure of a variant 434 repressor DNA-binding domain devoid of hydroxyl groups., Iwai H, Wider G, Wuthrich K, J Biomol NMR. 2004 Jul;29(3):395-8. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15213439 15213439]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
[[Category: Bacteriophage 434]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sq8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sq8 OCA], [https://pdbe.org/1sq8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sq8 RCSB], [https://www.ebi.ac.uk/pdbsum/1sq8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sq8 ProSAT]</span></td></tr>
[[Category: Single protein]]
</table>
[[Category: Iwai, H.]]
== Function ==
[[Category: Wider, G.]]
[https://www.uniprot.org/uniprot/RPC1_BP434 RPC1_BP434] Binds to two sets of three contiguous operator sites in the phage genome.
[[Category: Wuthrich, K.]]
== Evolutionary Conservation ==
[[Category: helix-turn-helix]]
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:04:12 2008''
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sq/1sq8_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sq8 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Phage 434]]
[[Category: Iwai H]]
[[Category: Wider G]]
[[Category: Wuthrich K]]

Latest revision as of 11:34, 1 May 2024

a variant 434 repressor DNA binding domain devoid of hydroxyl groups, NMR, 20 STRUCTURESa variant 434 repressor DNA binding domain devoid of hydroxyl groups, NMR, 20 STRUCTURES

Structural highlights

1sq8 is a 1 chain structure with sequence from Phage 434. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solution NMR
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RPC1_BP434 Binds to two sets of three contiguous operator sites in the phage genome.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA