1rfe: Difference between revisions

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OCA

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-[[Image:1rfe.gif|left|200px]]
- {{Structure
+==Crystal structure of conserved hypothetical protein Rv2991 from Mycobacterium tuberculosis==
-|PDB= 1rfe |SIZE=350|CAPTION= <scene name='initialview01'>1rfe</scene>, resolution 2.00&Aring;
+<StructureSection load='1rfe' size='340' side='right'caption='[[1rfe]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=CSX:S-OXY+CYSTEINE'>CSX</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+<table><tr><td colspan='2'>[[1rfe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis_H37Rv Mycobacterium tuberculosis H37Rv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RFE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RFE FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-|GENE=
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSX:S-OXY+CYSTEINE'>CSX</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01243 Pyridox_oxidase]</span>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rfe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rfe OCA], [https://pdbe.org/1rfe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rfe RCSB], [https://www.ebi.ac.uk/pdbsum/1rfe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rfe ProSAT], [https://www.topsan.org/Proteins/TBSGC/1rfe TOPSAN]</span></td></tr>
-|RELATEDENTRY=
+</table>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rfe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rfe OCA], [http://www.ebi.ac.uk/pdbsum/1rfe PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1rfe RCSB]</span>
+== Function ==
-}}
+[https://www.uniprot.org/uniprot/O53240_MYCTU O53240_MYCTU]
+== Evolutionary Conservation ==
-'''Crystal structure of conserved hypothetical protein Rv2991 from Mycobacterium tuberculosis'''
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
-==About this Structure==
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rf/1rfe_consurf.spt"</scriptWhenChecked>
-RFE is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mycobacterium_tuberculosis_h37rv Mycobacterium tuberculosis h37rv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RFE OCA].
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Mycobacterium tuberculosis h37rv]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Single protein]]
+  </jmolCheckbox>
-[[Category: Alzari, P.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1rfe ConSurf].
-[[Category: Benini, S.]]
+<div style="clear:both"></div>
-[[Category: Betton, J M.]]
+__TOC__
-[[Category: Dodson, G G.]]
+</StructureSection>
-[[Category: Haouz, A.]]
+[[Category: Large Structures]]
-[[Category: Proux, F.]]
+[[Category: Mycobacterium tuberculosis H37Rv]]
-[[Category: TBSGC, TB Structural Genomics Consortium.]]
+[[Category: Alzari P]]
-[[Category: Wilson, K S.]]
+[[Category: Benini S]]
-[[Category: fmn binding]]
+[[Category: Betton JM]]
-[[Category: mycobacterium tuberculosis]]
+[[Category: Dodson GG]]
-[[Category: protein structure initiative]]
+[[Category: Haouz A]]
-[[Category: psi]]
+[[Category: Proux F]]
-[[Category: structural genomic]]
+[[Category: Wilson KS]]
-[[Category: tb]]
-[[Category: tb structural genomics consortium]]
-[[Category: tbsgc]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:27:22 2008''