6alt: Difference between revisions

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 ==Solution structure of a DNA dodecamer with 5-methylcytosine at the 3rd and 9th position==
-<StructureSection load='6alt' size='340' side='right' caption='[[6alt]], [[NMR_Ensembles_of_Models | 11 NMR models]]' scene=''>
+<StructureSection load='6alt' size='340' side='right'caption='[[6alt]]' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[6alt]] is a 2 chain structure. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=5tmi 5tmi]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ALT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ALT FirstGlance]. <br>
+<table><tr><td colspan='2'>[[6alt]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=5tmi 5tmi]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ALT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ALT FirstGlance]. <br>
-</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=5CM:5-METHYL-2-DEOXY-CYTIDINE-5-MONOPHOSPHATE'>5CM</scene>, <scene name='pdbligand=DCZ:2-DEOXYCYTIDINE'>DCZ</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6alt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6alt OCA], [http://pdbe.org/6alt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6alt RCSB], [http://www.ebi.ac.uk/pdbsum/6alt PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6alt ProSAT]</span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5CM:5-METHYL-2-DEOXY-CYTIDINE-5-MONOPHOSPHATE'>5CM</scene>, <scene name='pdbligand=DCZ:2-DEOXYCYTIDINE'>DCZ</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6alt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6alt OCA], [https://pdbe.org/6alt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6alt RCSB], [https://www.ebi.ac.uk/pdbsum/6alt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6alt ProSAT]</span></td></tr>
 </table>
 __TOC__
 </StructureSection>
-[[Category: Gruber, D R]]
+[[Category: Large Structures]]
-[[Category: Hoppins, J J]]
+[[Category: Synthetic construct]]
-[[Category: Miears, H L]]
+[[Category: Gruber DR]]
-[[Category: Smirnov, S L]]
+[[Category: Hoppins JJ]]
-[[Category: Zharkov, D O]]
+[[Category: Miears HL]]
-[[Category: Dna]]
+[[Category: Smirnov SL]]
-[[Category: Drew-dickerson]]
+[[Category: Zharkov DO]]
-[[Category: Epigenetic]]
-[[Category: Modified dna]]
-[[Category: Non-canonical]]