3zdb: Difference between revisions

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'''Unreleased structure'''


The entry 3zdb is ON HOLD
==Structure of E. coli ExoIX in complex with the palindromic 5ov4 DNA oligonucleotide, di-magnesium and potassium==
 
<StructureSection load='3zdb' size='340' side='right'caption='[[3zdb]], [[Resolution|resolution]] 1.47&Aring;' scene=''>
Authors: Hemsworth, G.R., Anstey-Gilbert, C.S., Flemming, C.S., Hodskinson, M.R.G., Zhang, J., Sedelnikova, S.E., Stillman, T.J., Sayers, J.R., Artymiuk, P.J.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3zdb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZDB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZDB FirstGlance]. <br>
Description: Structure of E. coli ExoIX in complex with the palindromic 5ov4 DNA oligonucleotide, di-magnesium and potassium
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.47&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zdb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zdb OCA], [https://pdbe.org/3zdb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zdb RCSB], [https://www.ebi.ac.uk/pdbsum/3zdb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zdb ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/XNI_ECO57 XNI_ECO57] May have a role in processing of nucleic acids. It is probably not an exonuclease; metal-binding residues found in paralogs are missing (By similarity).
__TOC__
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Large Structures]]
[[Category: Synthetic construct]]
[[Category: Anstey-Gilbert CS]]
[[Category: Artymiuk PJ]]
[[Category: Flemming CS]]
[[Category: Hemsworth GR]]
[[Category: Hodskinson MRG]]
[[Category: Sayers JR]]
[[Category: Sedelnikova SE]]
[[Category: Stillman TJ]]
[[Category: Zhang J]]

Latest revision as of 10:12, 1 May 2024

Structure of E. coli ExoIX in complex with the palindromic 5ov4 DNA oligonucleotide, di-magnesium and potassiumStructure of E. coli ExoIX in complex with the palindromic 5ov4 DNA oligonucleotide, di-magnesium and potassium

Structural highlights

3zdb is a 2 chain structure with sequence from Escherichia coli and Synthetic construct. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.47Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

XNI_ECO57 May have a role in processing of nucleic acids. It is probably not an exonuclease; metal-binding residues found in paralogs are missing (By similarity).

3zdb, resolution 1.47Å

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OCA