2km4: Difference between revisions

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-[[Image:2km4.png|left|200px]]
-{{STRUCTURE_2km4|  PDB=2km4  |  SCENE=  }}
+==Solution structure of Rtt103 CTD interacting domain==
+<StructureSection load='2km4' size='340' side='right'caption='[[2km4]]' scene=''>
-===Solution structure of Rtt103 CTD interacting domain===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2km4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KM4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KM4 FirstGlance]. <br>
-{{ABSTRACT_PUBMED_20818393}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2km4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2km4 OCA], [https://pdbe.org/2km4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2km4 RCSB], [https://www.ebi.ac.uk/pdbsum/2km4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2km4 ProSAT]</span></td></tr>
-==About this Structure==
+</table>
-[[2km4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KM4 OCA].
+== Function ==
+[https://www.uniprot.org/uniprot/RT103_YEAST RT103_YEAST] Involved in transcription termination by RNA polymerase II and in regulation of Ty1 transposition.<ref>PMID:11779788</ref> <ref>PMID:15565157</ref>
-==Reference==
+== Evolutionary Conservation ==
-<ref group="xtra">PMID:020818393</ref><references group="xtra"/>
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/km/2km4_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2km4 ConSurf].
+<div style="clear:both"></div>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Saccharomyces cerevisiae]]
-[[Category: Becker, R.]]
+[[Category: Becker R]]
-[[Category: Buratowski, S.]]
+[[Category: Buratowski S]]
-[[Category: Kim, M.]]
+[[Category: Kim M]]
-[[Category: Leeper, T C.]]
+[[Category: Leeper TC]]
-[[Category: Lunde, B M.]]
+[[Category: Lunde BM]]
-[[Category: Meinhart, A.]]
+[[Category: Meinhart A]]
-[[Category: Reichow, S.]]
+[[Category: Reichow S]]
-[[Category: Varani, G.]]
+[[Category: Varani G]]
-[[Category: Ctd-interacting domain]]
-[[Category: Dna-binding]]
-[[Category: Nucleus]]
-[[Category: Phosphoprotein]]
-[[Category: Rna polymerase ii binding protein]]
-[[Category: Transcription]]
-[[Category: Transcription regulation]]
-[[Category: Transcription regulator]]
-[[Category: Transcription termination]]