2jr1: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2jr1.jpg|left|200px]]<br /><applet load="2jr1" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="2jr1" />
-'''Solution structure of the DNA binding domain of a nucleoid-associated protein, H-NS, from the phytopathogen Xylella fastidiosa.'''<br />
-==About this Structure==
+==Solution structure of the DNA binding domain of a nucleoid-associated protein, H-NS, from the phytopathogen Xylella fastidiosa.==
-JR1 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Xylella_fastidiosa Xylella fastidiosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JR1 OCA].
+<StructureSection load='2jr1' size='340' side='right'caption='[[2jr1]]' scene=''>
-[[Category: Single protein]]
+== Structural highlights ==
-[[Category: Xylella fastidiosa]]
+<table><tr><td colspan='2'>[[2jr1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Xylella_fastidiosa_9a5c Xylella fastidiosa 9a5c]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JR1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JR1 FirstGlance]. <br>
-[[Category: Rosselli, L.K.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-[[Category: Sforca, M.L.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jr1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jr1 OCA], [https://pdbe.org/2jr1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jr1 RCSB], [https://www.ebi.ac.uk/pdbsum/2jr1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jr1 ProSAT]</span></td></tr>
-[[Category: Souza, A.P.]]
+</table>
-[[Category: Zeri, A.C.]]
+== Function ==
-[[Category: dna biding protein]]
+[https://www.uniprot.org/uniprot/Q9PFC9_XYLFA Q9PFC9_XYLFA]
-[[Category: dna binding protein]]
+== Evolutionary Conservation ==
-[[Category: h-ns]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: xylella fastidiosa]]
+Check<jmol>
+  <jmolCheckbox>
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 13:26:32 2008''
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jr/2jr1_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jr1 ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Xylella fastidiosa 9a5c]]
+[[Category: Rosselli LK]]
+[[Category: Sforca ML]]
+[[Category: Souza AP]]
+[[Category: Zeri AC]]