2jaj: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(16 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2jaj.jpg|left|200px]]<br /><applet load="2jaj" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2jaj, resolution 2.00&Aring;" />
'''DDAH1 COMPLEXED WITH L-257'''<br />


==About this Structure==
==DDAH1 complexed with L-257==
2JAJ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with D20 as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Dimethylargininase Dimethylargininase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.3.18 3.5.3.18] Known structural/functional Site: <scene name='pdbsite=AC1:D20 Binding Site For Chain B'>AC1</scene>. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2JAJ OCA].  
<StructureSection load='2jaj' size='340' side='right'caption='[[2jaj]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
[[Category: Dimethylargininase]]
== Structural highlights ==
<table><tr><td colspan='2'>[[2jaj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JAJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JAJ FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=D20:N~5~-{IMINO[(2-METHOXYETHYL)AMINO]METHYL}-L-ORNITHINE'>D20</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jaj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jaj OCA], [https://pdbe.org/2jaj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jaj RCSB], [https://www.ebi.ac.uk/pdbsum/2jaj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jaj ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/DDAH1_HUMAN DDAH1_HUMAN] Hydrolyzes N(G),N(G)-dimethyl-L-arginine (ADMA) and N(G)-monomethyl-L-arginine (MMA) which act as inhibitors of NOS. Has therefore a role in the regulation of nitric oxide generation.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ja/2jaj_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jaj ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Hara, B.P.O.]]
[[Category: Leiper JM]]
[[Category: Leiper, J.M.]]
[[Category: McDonald NQ]]
[[Category: Mcdonald, N.Q.]]
[[Category: Murray-Rust J]]
[[Category: Murray-Rust, J.]]
[[Category: O'Hara BP]]
[[Category: Rossiter, S.]]
[[Category: Rossiter S]]
[[Category: Vallance, P.]]
[[Category: Vallance P]]
[[Category: D20]]
[[Category: ddah]]
[[Category: hydrolase]]
[[Category: nitric oxide synthase inhibitor]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Dec 18 19:57:56 2007''

Latest revision as of 09:41, 1 May 2024

DDAH1 complexed with L-257DDAH1 complexed with L-257

Structural highlights

2jaj is a 2 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

DDAH1_HUMAN Hydrolyzes N(G),N(G)-dimethyl-L-arginine (ADMA) and N(G)-monomethyl-L-arginine (MMA) which act as inhibitors of NOS. Has therefore a role in the regulation of nitric oxide generation.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2jaj, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA