2j55: Difference between revisions

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-[[Image:2j55.png|left|200px]]
-{{STRUCTURE_2j55|  PDB=2j55  |  SCENE=  }}
+==X-ray reduced Paraccocus denitrificans methylamine dehydrogenase O- quinone in complex with amicyanin.==
+<StructureSection load='2j55' size='340' side='right'caption='[[2j55]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
-===X-RAY REDUCED PARACCOCUS DENITRIFICANS METHYLAMINE DEHYDROGENASE O-QUINONE IN COMPLEX WITH AMICYANIN.===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2j55]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Paracoccus_denitrificans Paracoccus denitrificans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J55 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2J55 FirstGlance]. <br>
-{{ABSTRACT_PUBMED_17211075}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=TRQ:2-AMINO-3-(6,7-DIOXO-6,7-DIHYDRO-1H-INDOL-3-YL)-PROPIONIC+ACID'>TRQ</scene></td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2j55 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j55 OCA], [https://pdbe.org/2j55 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2j55 RCSB], [https://www.ebi.ac.uk/pdbsum/2j55 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2j55 ProSAT]</span></td></tr>
-[[2j55]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Paracoccus_denitrificans Paracoccus denitrificans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J55 OCA].
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/AMCY_PARDE AMCY_PARDE] Primary acceptor of electrons from methylamine dehydrogenase. Passes those electrons on either a soluble cytochrome c or to pseudoazurin.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j5/2j55_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2j55 ConSurf].
+<div style="clear:both"></div>
 ==See Also==
+*[[Amicyanin 3D structures|Amicyanin 3D structures]]
 *[[Methylamine dehydrogenase|Methylamine dehydrogenase]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:017211075</ref><references group="xtra"/>
+[[Category: Large Structures]]
-[[Category: Amine dehydrogenase]]
 [[Category: Paracoccus denitrificans]]
-[[Category: Davidson, V L.]]
+[[Category: Davidson VL]]
-[[Category: Pahl, R.]]
+[[Category: Pahl R]]
-[[Category: Pearson, A R.]]
+[[Category: Pearson AR]]
-[[Category: Wilmot, C M.]]
+[[Category: Wilmot CM]]
-[[Category: Electron transport]]
-[[Category: Metal-binding]]
-[[Category: Oxidoreductase]]
-[[Category: Periplasmic]]
-[[Category: Single crystal microspectrophotometry]]
-[[Category: Transport]]